Protein–RNA interactions for Protein: Q8NER1

TRPV1, Transient receptor potential cation channel subfamily V member 1, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1Q8NER1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRPV1Q8NER1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TRPV1Q8NER1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
TRPV1Q8NER1 SPCS2P3-201ENST00000500401 656 ntBASIC28.36■■■□□ 2.13
TRPV1Q8NER1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRPV1Q8NER1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRPV1Q8NER1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.35■■■□□ 2.13
TRPV1Q8NER1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRPV1Q8NER1 ST7-AS1-201ENST00000456775 1889 ntBASIC28.35■■■□□ 2.13
TRPV1Q8NER1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.34■■■□□ 2.13
TRPV1Q8NER1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.34■■■□□ 2.13
TRPV1Q8NER1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.34■■■□□ 2.13
TRPV1Q8NER1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.34■■■□□ 2.13
TRPV1Q8NER1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
TRPV1Q8NER1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
TRPV1Q8NER1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRPV1Q8NER1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.33■■■□□ 2.13
TRPV1Q8NER1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.33■■■□□ 2.13
TRPV1Q8NER1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.33■■■□□ 2.13
TRPV1Q8NER1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
TRPV1Q8NER1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TRPV1Q8NER1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.32■■■□□ 2.12
TRPV1Q8NER1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
TRPV1Q8NER1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TRPV1Q8NER1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TRPV1Q8NER1 AC010980.1-201ENST00000587192 1142 ntBASIC28.32■■■□□ 2.12
TRPV1Q8NER1 RAP2CP1-202ENST00000605179 643 ntBASIC28.32■■■□□ 2.12
TRPV1Q8NER1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TRPV1Q8NER1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.32■■■□□ 2.12
TRPV1Q8NER1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRPV1Q8NER1 RP9P-202ENST00000450133 1212 ntBASIC28.31■■■□□ 2.12
TRPV1Q8NER1 AC093536.1-201ENST00000569153 554 ntBASIC28.31■■■□□ 2.12
TRPV1Q8NER1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRPV1Q8NER1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.3■■■□□ 2.12
TRPV1Q8NER1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.3■■■□□ 2.12
TRPV1Q8NER1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.3■■■□□ 2.12
TRPV1Q8NER1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.3■■■□□ 2.12
TRPV1Q8NER1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
TRPV1Q8NER1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
TRPV1Q8NER1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TRPV1Q8NER1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TRPV1Q8NER1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
TRPV1Q8NER1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.27■■■□□ 2.12
TRPV1Q8NER1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TRPV1Q8NER1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.27■■■□□ 2.12
TRPV1Q8NER1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.27■■■□□ 2.12
TRPV1Q8NER1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TRPV1Q8NER1 KRT8P33-201ENST00000508125 1423 ntBASIC28.26■■■□□ 2.12
TRPV1Q8NER1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC28.26■■■□□ 2.12
TRPV1Q8NER1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRPV1Q8NER1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.26■■■□□ 2.11
TRPV1Q8NER1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
TRPV1Q8NER1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRPV1Q8NER1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRPV1Q8NER1 BHLHE23-202ENST00000612929 1109 ntBASIC28.25■■■□□ 2.11
TRPV1Q8NER1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.25■■■□□ 2.11
TRPV1Q8NER1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRPV1Q8NER1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRPV1Q8NER1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRPV1Q8NER1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRPV1Q8NER1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRPV1Q8NER1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC28.23■■■□□ 2.11
TRPV1Q8NER1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.23■■■□□ 2.11
TRPV1Q8NER1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
TRPV1Q8NER1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
TRPV1Q8NER1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRPV1Q8NER1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.23■■■□□ 2.11
TRPV1Q8NER1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRPV1Q8NER1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRPV1Q8NER1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.22■■■□□ 2.11
TRPV1Q8NER1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.22■■■□□ 2.11
TRPV1Q8NER1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.22■■■□□ 2.11
TRPV1Q8NER1 AL592295.1-201ENST00000400984 884 ntBASIC28.22■■■□□ 2.11
TRPV1Q8NER1 AC103834.1-201ENST00000520383 144 ntBASIC28.22■■■□□ 2.11
TRPV1Q8NER1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.22■■■□□ 2.11
TRPV1Q8NER1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRPV1Q8NER1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
TRPV1Q8NER1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC28.21■■■□□ 2.11
TRPV1Q8NER1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TRPV1Q8NER1 PVT1_1.1-201ENST00000615125 194 ntBASIC28.21■■■□□ 2.11
TRPV1Q8NER1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRPV1Q8NER1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TRPV1Q8NER1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.2■■■□□ 2.1
TRPV1Q8NER1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRPV1Q8NER1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
TRPV1Q8NER1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.19■■■□□ 2.1
TRPV1Q8NER1 AC009299.2-201ENST00000482477 511 ntBASIC28.19■■■□□ 2.1
TRPV1Q8NER1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.19■■■□□ 2.1
TRPV1Q8NER1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.18■■■□□ 2.1
TRPV1Q8NER1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRPV1Q8NER1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRPV1Q8NER1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRPV1Q8NER1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRPV1Q8NER1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRPV1Q8NER1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.17■■■□□ 2.1
TRPV1Q8NER1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRPV1Q8NER1 AC074183.2-201ENST00000623112 922 ntBASIC28.17■■■□□ 2.1
TRPV1Q8NER1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRPV1Q8NER1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.16■■■□□ 2.1
TRPV1Q8NER1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms