Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.31■■□□□ 1.96
ZSWIM2Q8NEG5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ZSWIM2Q8NEG5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.3■■□□□ 1.96
ZSWIM2Q8NEG5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
ZSWIM2Q8NEG5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
ZSWIM2Q8NEG5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ZSWIM2Q8NEG5 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ZSWIM2Q8NEG5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ZSWIM2Q8NEG5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC27.29■■□□□ 1.96
ZSWIM2Q8NEG5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.29■■□□□ 1.96
ZSWIM2Q8NEG5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZSWIM2Q8NEG5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZSWIM2Q8NEG5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC27.28■■□□□ 1.96
ZSWIM2Q8NEG5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZSWIM2Q8NEG5 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
ZSWIM2Q8NEG5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
ZSWIM2Q8NEG5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
ZSWIM2Q8NEG5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZSWIM2Q8NEG5 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.26■■□□□ 1.95
ZSWIM2Q8NEG5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ZSWIM2Q8NEG5 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.26■■□□□ 1.95
ZSWIM2Q8NEG5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.25■■□□□ 1.95
ZSWIM2Q8NEG5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZSWIM2Q8NEG5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.25■■□□□ 1.95
ZSWIM2Q8NEG5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.25■■□□□ 1.95
ZSWIM2Q8NEG5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
ZSWIM2Q8NEG5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.25■■□□□ 1.95
ZSWIM2Q8NEG5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC27.24■■□□□ 1.95
ZSWIM2Q8NEG5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
ZSWIM2Q8NEG5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZSWIM2Q8NEG5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.24■■□□□ 1.95
ZSWIM2Q8NEG5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZSWIM2Q8NEG5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZSWIM2Q8NEG5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZSWIM2Q8NEG5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZSWIM2Q8NEG5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZSWIM2Q8NEG5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZSWIM2Q8NEG5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZSWIM2Q8NEG5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZSWIM2Q8NEG5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZSWIM2Q8NEG5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZSWIM2Q8NEG5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZSWIM2Q8NEG5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZSWIM2Q8NEG5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
ZSWIM2Q8NEG5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.22■■□□□ 1.95
ZSWIM2Q8NEG5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZSWIM2Q8NEG5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.22■■□□□ 1.95
ZSWIM2Q8NEG5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.22■■□□□ 1.95
ZSWIM2Q8NEG5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZSWIM2Q8NEG5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
ZSWIM2Q8NEG5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZSWIM2Q8NEG5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZSWIM2Q8NEG5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ZSWIM2Q8NEG5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.21■■□□□ 1.95
ZSWIM2Q8NEG5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZSWIM2Q8NEG5 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.21■■□□□ 1.95
ZSWIM2Q8NEG5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
ZSWIM2Q8NEG5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.2■■□□□ 1.95
ZSWIM2Q8NEG5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ZSWIM2Q8NEG5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.2■■□□□ 1.94
ZSWIM2Q8NEG5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.2■■□□□ 1.94
ZSWIM2Q8NEG5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ZSWIM2Q8NEG5 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ZSWIM2Q8NEG5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ZSWIM2Q8NEG5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.19■■□□□ 1.94
ZSWIM2Q8NEG5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
ZSWIM2Q8NEG5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ZSWIM2Q8NEG5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ZSWIM2Q8NEG5 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ZSWIM2Q8NEG5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.18■■□□□ 1.94
ZSWIM2Q8NEG5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
ZSWIM2Q8NEG5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.18■■□□□ 1.94
ZSWIM2Q8NEG5 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ZSWIM2Q8NEG5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ZSWIM2Q8NEG5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
ZSWIM2Q8NEG5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
ZSWIM2Q8NEG5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ZSWIM2Q8NEG5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
ZSWIM2Q8NEG5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
ZSWIM2Q8NEG5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
ZSWIM2Q8NEG5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.16■■□□□ 1.94
ZSWIM2Q8NEG5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ZSWIM2Q8NEG5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ZSWIM2Q8NEG5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ZSWIM2Q8NEG5 AL449106.1-201ENST00000608517 1980 ntBASIC27.15■■□□□ 1.94
ZSWIM2Q8NEG5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.15■■□□□ 1.94
ZSWIM2Q8NEG5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
ZSWIM2Q8NEG5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.14■■□□□ 1.94
ZSWIM2Q8NEG5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
ZSWIM2Q8NEG5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.14■■□□□ 1.94
ZSWIM2Q8NEG5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
ZSWIM2Q8NEG5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
ZSWIM2Q8NEG5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
ZSWIM2Q8NEG5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ZSWIM2Q8NEG5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ZSWIM2Q8NEG5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ZSWIM2Q8NEG5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ZSWIM2Q8NEG5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC27.13■■□□□ 1.93
ZSWIM2Q8NEG5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ZSWIM2Q8NEG5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms