Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 AL035685.1-201ENST00000636663 812 ntBASIC31.71■■■□□ 2.67
CARMIL3Q8ND23 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
CARMIL3Q8ND23 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CARMIL3Q8ND23 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.7■■■□□ 2.67
CARMIL3Q8ND23 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
CARMIL3Q8ND23 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
CARMIL3Q8ND23 SMPD5-203ENST00000639008 1464 ntBASIC31.7■■■□□ 2.67
CARMIL3Q8ND23 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CARMIL3Q8ND23 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
CARMIL3Q8ND23 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.69■■■□□ 2.66
CARMIL3Q8ND23 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.69■■■□□ 2.66
CARMIL3Q8ND23 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CARMIL3Q8ND23 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
CARMIL3Q8ND23 AL359258.2-201ENST00000564063 1566 ntBASIC31.68■■■□□ 2.66
CARMIL3Q8ND23 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
CARMIL3Q8ND23 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CARMIL3Q8ND23 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.66■■■□□ 2.66
CARMIL3Q8ND23 AC100797.4-201ENST00000631653 1827 ntBASIC31.66■■■□□ 2.66
CARMIL3Q8ND23 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CARMIL3Q8ND23 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CARMIL3Q8ND23 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.66■■■□□ 2.66
CARMIL3Q8ND23 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
CARMIL3Q8ND23 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CARMIL3Q8ND23 AC026202.3-201ENST00000600805 1127 ntBASIC31.66■■■□□ 2.66
CARMIL3Q8ND23 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
CARMIL3Q8ND23 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
CARMIL3Q8ND23 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CARMIL3Q8ND23 AC025884.2-201ENST00000553429 711 ntBASIC31.65■■■□□ 2.66
CARMIL3Q8ND23 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.65■■■□□ 2.66
CARMIL3Q8ND23 ST7-AS1-201ENST00000456775 1889 ntBASIC31.64■■■□□ 2.66
CARMIL3Q8ND23 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
CARMIL3Q8ND23 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
CARMIL3Q8ND23 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.62■■■□□ 2.65
CARMIL3Q8ND23 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.62■■■□□ 2.65
CARMIL3Q8ND23 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.62■■■□□ 2.65
CARMIL3Q8ND23 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CARMIL3Q8ND23 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CARMIL3Q8ND23 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.61■■■□□ 2.65
CARMIL3Q8ND23 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.61■■■□□ 2.65
CARMIL3Q8ND23 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.61■■■□□ 2.65
CARMIL3Q8ND23 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CARMIL3Q8ND23 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
CARMIL3Q8ND23 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CARMIL3Q8ND23 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CARMIL3Q8ND23 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CARMIL3Q8ND23 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
CARMIL3Q8ND23 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.6■■■□□ 2.65
CARMIL3Q8ND23 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.6■■■□□ 2.65
CARMIL3Q8ND23 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.59■■■□□ 2.65
CARMIL3Q8ND23 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CARMIL3Q8ND23 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.59■■■□□ 2.65
CARMIL3Q8ND23 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
CARMIL3Q8ND23 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.58■■■□□ 2.65
CARMIL3Q8ND23 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
CARMIL3Q8ND23 DUX4L9-201ENST00000449051 1259 ntBASIC31.57■■■□□ 2.64
CARMIL3Q8ND23 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.57■■■□□ 2.64
CARMIL3Q8ND23 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
CARMIL3Q8ND23 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
CARMIL3Q8ND23 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CARMIL3Q8ND23 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.56■■■□□ 2.64
CARMIL3Q8ND23 RP9P-202ENST00000450133 1212 ntBASIC31.56■■■□□ 2.64
CARMIL3Q8ND23 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.56■■■□□ 2.64
CARMIL3Q8ND23 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CARMIL3Q8ND23 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CARMIL3Q8ND23 SPCS2P3-201ENST00000500401 656 ntBASIC31.54■■■□□ 2.64
CARMIL3Q8ND23 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.54■■■□□ 2.64
CARMIL3Q8ND23 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.53■■■□□ 2.64
CARMIL3Q8ND23 AC093536.1-201ENST00000569153 554 ntBASIC31.53■■■□□ 2.64
CARMIL3Q8ND23 RAP2CP1-202ENST00000605179 643 ntBASIC31.53■■■□□ 2.64
CARMIL3Q8ND23 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
CARMIL3Q8ND23 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.52■■■□□ 2.64
CARMIL3Q8ND23 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.51■■■□□ 2.64
CARMIL3Q8ND23 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CARMIL3Q8ND23 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CARMIL3Q8ND23 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
CARMIL3Q8ND23 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.5■■■□□ 2.63
CARMIL3Q8ND23 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CARMIL3Q8ND23 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.5■■■□□ 2.63
CARMIL3Q8ND23 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CARMIL3Q8ND23 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.49■■■□□ 2.63
CARMIL3Q8ND23 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.49■■■□□ 2.63
CARMIL3Q8ND23 AC010980.1-201ENST00000587192 1142 ntBASIC31.48■■■□□ 2.63
CARMIL3Q8ND23 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.47■■■□□ 2.63
CARMIL3Q8ND23 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CARMIL3Q8ND23 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.47■■■□□ 2.63
CARMIL3Q8ND23 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CARMIL3Q8ND23 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CARMIL3Q8ND23 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CARMIL3Q8ND23 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.46■■■□□ 2.63
CARMIL3Q8ND23 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
CARMIL3Q8ND23 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CARMIL3Q8ND23 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.46■■■□□ 2.63
CARMIL3Q8ND23 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
CARMIL3Q8ND23 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CARMIL3Q8ND23 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
CARMIL3Q8ND23 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CARMIL3Q8ND23 KRT8P33-201ENST00000508125 1423 ntBASIC31.45■■■□□ 2.63
CARMIL3Q8ND23 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
CARMIL3Q8ND23 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.45■■■□□ 2.63
CARMIL3Q8ND23 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 1572.3 ms