Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST3H2BBQ8N257 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.9■□□□□ 0.62
HIST3H2BBQ8N257 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST3H2BBQ8N257 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIST3H2BBQ8N257 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIST3H2BBQ8N257 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIST3H2BBQ8N257 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST3H2BBQ8N257 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIST3H2BBQ8N257 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST3H2BBQ8N257 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
HIST3H2BBQ8N257 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST3H2BBQ8N257 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HIST3H2BBQ8N257 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
HIST3H2BBQ8N257 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.87■□□□□ 0.61
HIST3H2BBQ8N257 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HIST3H2BBQ8N257 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC18.87■□□□□ 0.61
HIST3H2BBQ8N257 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.87■□□□□ 0.61
HIST3H2BBQ8N257 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HIST3H2BBQ8N257 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST3H2BBQ8N257 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST3H2BBQ8N257 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST3H2BBQ8N257 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST3H2BBQ8N257 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST3H2BBQ8N257 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.86■□□□□ 0.61
HIST3H2BBQ8N257 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST3H2BBQ8N257 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HIST3H2BBQ8N257 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST3H2BBQ8N257 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
HIST3H2BBQ8N257 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST3H2BBQ8N257 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.84■□□□□ 0.61
HIST3H2BBQ8N257 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.84■□□□□ 0.61
HIST3H2BBQ8N257 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HIST3H2BBQ8N257 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC18.84■□□□□ 0.61
HIST3H2BBQ8N257 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST3H2BBQ8N257 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST3H2BBQ8N257 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST3H2BBQ8N257 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
HIST3H2BBQ8N257 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.83■□□□□ 0.61
HIST3H2BBQ8N257 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST3H2BBQ8N257 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.82■□□□□ 0.6
HIST3H2BBQ8N257 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST3H2BBQ8N257 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST3H2BBQ8N257 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST3H2BBQ8N257 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST3H2BBQ8N257 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST3H2BBQ8N257 AL024507.2-201ENST00000606070 2574 ntBASIC18.81■□□□□ 0.6
HIST3H2BBQ8N257 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST3H2BBQ8N257 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST3H2BBQ8N257 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST3H2BBQ8N257 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HIST3H2BBQ8N257 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST3H2BBQ8N257 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST3H2BBQ8N257 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.81■□□□□ 0.6
HIST3H2BBQ8N257 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST3H2BBQ8N257 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HIST3H2BBQ8N257 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H2BBQ8N257 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H2BBQ8N257 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H2BBQ8N257 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.79■□□□□ 0.6
HIST3H2BBQ8N257 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H2BBQ8N257 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.78■□□□□ 0.6
HIST3H2BBQ8N257 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H2BBQ8N257 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H2BBQ8N257 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.78■□□□□ 0.6
HIST3H2BBQ8N257 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST3H2BBQ8N257 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H2BBQ8N257 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HIST3H2BBQ8N257 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST3H2BBQ8N257 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HIST3H2BBQ8N257 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST3H2BBQ8N257 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST3H2BBQ8N257 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HIST3H2BBQ8N257 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST3H2BBQ8N257 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST3H2BBQ8N257 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HIST3H2BBQ8N257 AC092803.2-201ENST00000564287 1899 ntBASIC18.75■□□□□ 0.59
HIST3H2BBQ8N257 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HIST3H2BBQ8N257 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HIST3H2BBQ8N257 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
HIST3H2BBQ8N257 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.74■□□□□ 0.59
HIST3H2BBQ8N257 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2BBQ8N257 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2BBQ8N257 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2BBQ8N257 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.74■□□□□ 0.59
HIST3H2BBQ8N257 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2BBQ8N257 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HIST3H2BBQ8N257 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST3H2BBQ8N257 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST3H2BBQ8N257 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.72■□□□□ 0.59
HIST3H2BBQ8N257 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST3H2BBQ8N257 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.72■□□□□ 0.59
HIST3H2BBQ8N257 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST3H2BBQ8N257 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST3H2BBQ8N257 AL139125.2-201ENST00000623134 1869 ntBASIC18.71■□□□□ 0.59
HIST3H2BBQ8N257 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HIST3H2BBQ8N257 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST3H2BBQ8N257 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST3H2BBQ8N257 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
HIST3H2BBQ8N257 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST3H2BBQ8N257 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms