Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC133552.2-201ENST00000619106 1032 ntBASIC26.46■■□□□ 1.83
RNF135Q8IUD6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RNF135Q8IUD6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RNF135Q8IUD6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
RNF135Q8IUD6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
RNF135Q8IUD6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
RNF135Q8IUD6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RNF135Q8IUD6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.45■■□□□ 1.82
RNF135Q8IUD6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RNF135Q8IUD6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RNF135Q8IUD6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
RNF135Q8IUD6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.44■■□□□ 1.82
RNF135Q8IUD6 AC007029.1-201ENST00000604183 313 ntBASIC26.44■■□□□ 1.82
RNF135Q8IUD6 AC009831.1-201ENST00000580420 1582 ntBASIC26.44■■□□□ 1.82
RNF135Q8IUD6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.44■■□□□ 1.82
RNF135Q8IUD6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RNF135Q8IUD6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
RNF135Q8IUD6 AC139426.1-201ENST00000568218 2529 ntBASIC26.43■■□□□ 1.82
RNF135Q8IUD6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
RNF135Q8IUD6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RNF135Q8IUD6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNF135Q8IUD6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNF135Q8IUD6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RNF135Q8IUD6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RNF135Q8IUD6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF135Q8IUD6 AL157400.5-201ENST00000507624 621 ntBASIC26.41■■□□□ 1.82
RNF135Q8IUD6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF135Q8IUD6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RNF135Q8IUD6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.4■■□□□ 1.82
RNF135Q8IUD6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RNF135Q8IUD6 AC009299.2-201ENST00000482477 511 ntBASIC26.39■■□□□ 1.82
RNF135Q8IUD6 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.39■■□□□ 1.82
RNF135Q8IUD6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RNF135Q8IUD6 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.39■■□□□ 1.82
RNF135Q8IUD6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RNF135Q8IUD6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RNF135Q8IUD6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF135Q8IUD6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RNF135Q8IUD6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF135Q8IUD6 THA1P-201ENST00000590384 1145 ntBASIC26.38■■□□□ 1.81
RNF135Q8IUD6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF135Q8IUD6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.38■■□□□ 1.81
RNF135Q8IUD6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF135Q8IUD6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
RNF135Q8IUD6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.37■■□□□ 1.81
RNF135Q8IUD6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.37■■□□□ 1.81
RNF135Q8IUD6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.37■■□□□ 1.81
RNF135Q8IUD6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
RNF135Q8IUD6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.37■■□□□ 1.81
RNF135Q8IUD6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF135Q8IUD6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.36■■□□□ 1.81
RNF135Q8IUD6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF135Q8IUD6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.36■■□□□ 1.81
RNF135Q8IUD6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF135Q8IUD6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
RNF135Q8IUD6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
RNF135Q8IUD6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
RNF135Q8IUD6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF135Q8IUD6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RNF135Q8IUD6 KRT8P33-201ENST00000508125 1423 ntBASIC26.35■■□□□ 1.81
RNF135Q8IUD6 BHLHE23-202ENST00000612929 1109 ntBASIC26.35■■□□□ 1.81
RNF135Q8IUD6 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.35■■□□□ 1.81
RNF135Q8IUD6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
RNF135Q8IUD6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
RNF135Q8IUD6 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.34■■□□□ 1.81
RNF135Q8IUD6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.34■■□□□ 1.81
RNF135Q8IUD6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNF135Q8IUD6 MIR935-201ENST00000401179 91 ntBASIC26.33■■□□□ 1.81
RNF135Q8IUD6 RP9P-202ENST00000450133 1212 ntBASIC26.33■■□□□ 1.81
RNF135Q8IUD6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.33■■□□□ 1.81
RNF135Q8IUD6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.33■■□□□ 1.81
RNF135Q8IUD6 AC010980.1-201ENST00000587192 1142 ntBASIC26.33■■□□□ 1.81
RNF135Q8IUD6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
RNF135Q8IUD6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
RNF135Q8IUD6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF135Q8IUD6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RNF135Q8IUD6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF135Q8IUD6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RNF135Q8IUD6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
RNF135Q8IUD6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RNF135Q8IUD6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF135Q8IUD6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RNF135Q8IUD6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF135Q8IUD6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF135Q8IUD6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF135Q8IUD6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF135Q8IUD6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
RNF135Q8IUD6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
RNF135Q8IUD6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF135Q8IUD6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RNF135Q8IUD6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF135Q8IUD6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.29■■□□□ 1.8
RNF135Q8IUD6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF135Q8IUD6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
RNF135Q8IUD6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.28■■□□□ 1.8
RNF135Q8IUD6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
RNF135Q8IUD6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.28■■□□□ 1.8
RNF135Q8IUD6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF135Q8IUD6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF135Q8IUD6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms