Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
VRK2Q86Y07 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
VRK2Q86Y07 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.05■■□□□ 1.28
VRK2Q86Y07 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.04■■□□□ 1.28
VRK2Q86Y07 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.04■■□□□ 1.28
VRK2Q86Y07 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VRK2Q86Y07 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.03■■□□□ 1.28
VRK2Q86Y07 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
VRK2Q86Y07 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VRK2Q86Y07 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.02■■□□□ 1.28
VRK2Q86Y07 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
VRK2Q86Y07 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VRK2Q86Y07 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.02■■□□□ 1.28
VRK2Q86Y07 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VRK2Q86Y07 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
VRK2Q86Y07 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.01■■□□□ 1.27
VRK2Q86Y07 AL449106.1-201ENST00000608517 1980 ntBASIC23.01■■□□□ 1.27
VRK2Q86Y07 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.01■■□□□ 1.27
VRK2Q86Y07 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23■■□□□ 1.27
VRK2Q86Y07 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23■■□□□ 1.27
VRK2Q86Y07 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23■■□□□ 1.27
VRK2Q86Y07 LINC01971-201ENST00000617888 1048 ntBASIC23■■□□□ 1.27
VRK2Q86Y07 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VRK2Q86Y07 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VRK2Q86Y07 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23■■□□□ 1.27
VRK2Q86Y07 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VRK2Q86Y07 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VRK2Q86Y07 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VRK2Q86Y07 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VRK2Q86Y07 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VRK2Q86Y07 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VRK2Q86Y07 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
VRK2Q86Y07 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
VRK2Q86Y07 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VRK2Q86Y07 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VRK2Q86Y07 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.98■■□□□ 1.27
VRK2Q86Y07 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VRK2Q86Y07 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.96■■□□□ 1.27
VRK2Q86Y07 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
VRK2Q86Y07 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.95■■□□□ 1.26
VRK2Q86Y07 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
VRK2Q86Y07 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.95■■□□□ 1.26
VRK2Q86Y07 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.95■■□□□ 1.26
VRK2Q86Y07 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
VRK2Q86Y07 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.94■■□□□ 1.26
VRK2Q86Y07 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VRK2Q86Y07 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VRK2Q86Y07 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
VRK2Q86Y07 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.94■■□□□ 1.26
VRK2Q86Y07 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
VRK2Q86Y07 AP004609.3-201ENST00000610705 1884 ntBASIC22.94■■□□□ 1.26
VRK2Q86Y07 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
VRK2Q86Y07 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
VRK2Q86Y07 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
VRK2Q86Y07 DUX4L13-201ENST00000554103 1267 ntBASIC22.93■■□□□ 1.26
VRK2Q86Y07 DUX4L15-201ENST00000611059 1267 ntBASIC22.93■■□□□ 1.26
VRK2Q86Y07 DUX4L23-201ENST00000615195 1269 ntBASIC22.93■■□□□ 1.26
VRK2Q86Y07 DUX4L24-201ENST00000617576 1269 ntBASIC22.93■■□□□ 1.26
VRK2Q86Y07 DUX4L22-201ENST00000618238 1269 ntBASIC22.93■■□□□ 1.26
VRK2Q86Y07 DUX4L20-201ENST00000619712 1269 ntBASIC22.93■■□□□ 1.26
VRK2Q86Y07 DUX4L21-201ENST00000622058 1269 ntBASIC22.93■■□□□ 1.26
VRK2Q86Y07 DUX4L10-201ENST00000622460 1267 ntBASIC22.93■■□□□ 1.26
VRK2Q86Y07 DUX4L25-201ENST00000624915 1269 ntBASIC22.93■■□□□ 1.26
VRK2Q86Y07 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
VRK2Q86Y07 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
VRK2Q86Y07 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.92■■□□□ 1.26
VRK2Q86Y07 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.92■■□□□ 1.26
VRK2Q86Y07 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.92■■□□□ 1.26
VRK2Q86Y07 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VRK2Q86Y07 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VRK2Q86Y07 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
VRK2Q86Y07 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
VRK2Q86Y07 WHAMMP3-201ENST00000611636 1609 ntBASIC22.91■■□□□ 1.26
VRK2Q86Y07 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
VRK2Q86Y07 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.91■■□□□ 1.26
VRK2Q86Y07 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.91■■□□□ 1.26
VRK2Q86Y07 DUX4L11-201ENST00000611504 1267 ntBASIC22.91■■□□□ 1.26
VRK2Q86Y07 DUX4L12-201ENST00000614593 1267 ntBASIC22.91■■□□□ 1.26
VRK2Q86Y07 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.91■■□□□ 1.26
VRK2Q86Y07 DUX4L14-201ENST00000621227 1267 ntBASIC22.91■■□□□ 1.26
VRK2Q86Y07 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
VRK2Q86Y07 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.91■■□□□ 1.26
VRK2Q86Y07 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
VRK2Q86Y07 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.9■■□□□ 1.26
VRK2Q86Y07 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VRK2Q86Y07 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
VRK2Q86Y07 ZNRF2P2-203ENST00000454624 420 ntBASIC22.9■■□□□ 1.26
VRK2Q86Y07 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
VRK2Q86Y07 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
VRK2Q86Y07 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
VRK2Q86Y07 AC091060.1-201ENST00000623524 1766 ntBASIC22.89■■□□□ 1.25
VRK2Q86Y07 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
VRK2Q86Y07 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
VRK2Q86Y07 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.88■■□□□ 1.25
VRK2Q86Y07 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
VRK2Q86Y07 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.87■■□□□ 1.25
VRK2Q86Y07 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
VRK2Q86Y07 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.86■■□□□ 1.25
VRK2Q86Y07 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
VRK2Q86Y07 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms