Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.57■■□□□ 1.68
CCDC25Q86WR0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC25Q86WR0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.56■■□□□ 1.68
CCDC25Q86WR0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC25Q86WR0 AC020928.2-201ENST00000588717 2197 ntBASIC25.55■■□□□ 1.68
CCDC25Q86WR0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC25Q86WR0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
CCDC25Q86WR0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC25Q86WR0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.54■■□□□ 1.68
CCDC25Q86WR0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC25Q86WR0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.54■■□□□ 1.68
CCDC25Q86WR0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.54■■□□□ 1.68
CCDC25Q86WR0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC25Q86WR0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC25Q86WR0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC25Q86WR0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.53■■□□□ 1.68
CCDC25Q86WR0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.53■■□□□ 1.68
CCDC25Q86WR0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC25Q86WR0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC25Q86WR0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.52■■□□□ 1.68
CCDC25Q86WR0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC25Q86WR0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC25Q86WR0 AC108673.1-201ENST00000510422 1159 ntBASIC25.52■■□□□ 1.68
CCDC25Q86WR0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
CCDC25Q86WR0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.51■■□□□ 1.67
CCDC25Q86WR0 MIR6090-201ENST00000622481 60 ntBASIC25.51■■□□□ 1.67
CCDC25Q86WR0 LINC00273-201ENST00000539813 1452 ntBASIC25.51■■□□□ 1.67
CCDC25Q86WR0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC25Q86WR0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC25Q86WR0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC25Q86WR0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC25Q86WR0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.49■■□□□ 1.67
CCDC25Q86WR0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC25Q86WR0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.49■■□□□ 1.67
CCDC25Q86WR0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC25Q86WR0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC25Q86WR0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
CCDC25Q86WR0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC25Q86WR0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.47■■□□□ 1.67
CCDC25Q86WR0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
CCDC25Q86WR0 SUZ12P1-203ENST00000578195 985 ntBASIC25.47■■□□□ 1.67
CCDC25Q86WR0 AP004609.3-201ENST00000610705 1884 ntBASIC25.47■■□□□ 1.67
CCDC25Q86WR0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC25Q86WR0 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.46■■□□□ 1.67
CCDC25Q86WR0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC25Q86WR0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC25Q86WR0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC25Q86WR0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.45■■□□□ 1.67
CCDC25Q86WR0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CCDC25Q86WR0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC25Q86WR0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC25Q86WR0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
CCDC25Q86WR0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC25Q86WR0 AC092803.2-201ENST00000564287 1899 ntBASIC25.45■■□□□ 1.66
CCDC25Q86WR0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC25Q86WR0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC25Q86WR0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC25Q86WR0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC25Q86WR0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC25Q86WR0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC25Q86WR0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.43■■□□□ 1.66
CCDC25Q86WR0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC25Q86WR0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC25Q86WR0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
CCDC25Q86WR0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC25Q86WR0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.41■■□□□ 1.66
CCDC25Q86WR0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CCDC25Q86WR0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC25Q86WR0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC25Q86WR0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.4■■□□□ 1.66
CCDC25Q86WR0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC25Q86WR0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC25Q86WR0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC25Q86WR0 DUSP8P4-201ENST00000399538 1761 ntBASIC25.39■■□□□ 1.66
CCDC25Q86WR0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
CCDC25Q86WR0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC25Q86WR0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC25Q86WR0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC25Q86WR0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC25Q86WR0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
CCDC25Q86WR0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.37■■□□□ 1.65
CCDC25Q86WR0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC25Q86WR0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC25Q86WR0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
CCDC25Q86WR0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
CCDC25Q86WR0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC25Q86WR0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CCDC25Q86WR0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.36■■□□□ 1.65
CCDC25Q86WR0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.36■■□□□ 1.65
CCDC25Q86WR0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC25Q86WR0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.36■■□□□ 1.65
CCDC25Q86WR0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.36■■□□□ 1.65
CCDC25Q86WR0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC25Q86WR0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC25Q86WR0 DUX4L28-201ENST00000623687 678 ntBASIC25.35■■□□□ 1.65
CCDC25Q86WR0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.35■■□□□ 1.65
CCDC25Q86WR0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC25Q86WR0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC25Q86WR0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC25Q86WR0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms