Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
LRRTM3Q86VH5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
LRRTM3Q86VH5 ABHD17AP5-201ENST00000580133 923 ntBASIC26.58■■□□□ 1.85
LRRTM3Q86VH5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
LRRTM3Q86VH5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LRRTM3Q86VH5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.57■■□□□ 1.84
LRRTM3Q86VH5 DRD5P2-201ENST00000421395 2012 ntBASIC26.57■■□□□ 1.84
LRRTM3Q86VH5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
LRRTM3Q86VH5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LRRTM3Q86VH5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.56■■□□□ 1.84
LRRTM3Q86VH5 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRRTM3Q86VH5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
LRRTM3Q86VH5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.55■■□□□ 1.84
LRRTM3Q86VH5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
LRRTM3Q86VH5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.55■■□□□ 1.84
LRRTM3Q86VH5 AC126177.7-201ENST00000547904 679 ntBASIC26.55■■□□□ 1.84
LRRTM3Q86VH5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.55■■□□□ 1.84
LRRTM3Q86VH5 AC018358.1-201ENST00000631079 1402 ntBASIC26.55■■□□□ 1.84
LRRTM3Q86VH5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRRTM3Q86VH5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.54■■□□□ 1.84
LRRTM3Q86VH5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LRRTM3Q86VH5 AL157400.5-201ENST00000507624 621 ntBASIC26.54■■□□□ 1.84
LRRTM3Q86VH5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.54■■□□□ 1.84
LRRTM3Q86VH5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
LRRTM3Q86VH5 AL359258.2-201ENST00000564063 1566 ntBASIC26.54■■□□□ 1.84
LRRTM3Q86VH5 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LRRTM3Q86VH5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
LRRTM3Q86VH5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LRRTM3Q86VH5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.53■■□□□ 1.84
LRRTM3Q86VH5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LRRTM3Q86VH5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.84
LRRTM3Q86VH5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LRRTM3Q86VH5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
LRRTM3Q86VH5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LRRTM3Q86VH5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.51■■□□□ 1.83
LRRTM3Q86VH5 ECEL1P2-201ENST00000461596 1295 ntBASIC26.51■■□□□ 1.83
LRRTM3Q86VH5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
LRRTM3Q86VH5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.51■■□□□ 1.83
LRRTM3Q86VH5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
LRRTM3Q86VH5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRRTM3Q86VH5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRRTM3Q86VH5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LRRTM3Q86VH5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
LRRTM3Q86VH5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
LRRTM3Q86VH5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
LRRTM3Q86VH5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
LRRTM3Q86VH5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LRRTM3Q86VH5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LRRTM3Q86VH5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.47■■□□□ 1.83
LRRTM3Q86VH5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
LRRTM3Q86VH5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LRRTM3Q86VH5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.46■■□□□ 1.83
LRRTM3Q86VH5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
LRRTM3Q86VH5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.46■■□□□ 1.83
LRRTM3Q86VH5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.45■■□□□ 1.82
LRRTM3Q86VH5 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
LRRTM3Q86VH5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
LRRTM3Q86VH5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LRRTM3Q86VH5 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.43■■□□□ 1.82
LRRTM3Q86VH5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
LRRTM3Q86VH5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LRRTM3Q86VH5 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.43■■□□□ 1.82
LRRTM3Q86VH5 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
LRRTM3Q86VH5 NTF6A-201ENST00000591175 560 ntBASIC26.42■■□□□ 1.82
LRRTM3Q86VH5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.42■■□□□ 1.82
LRRTM3Q86VH5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.41■■□□□ 1.82
LRRTM3Q86VH5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LRRTM3Q86VH5 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LRRTM3Q86VH5 U85056.1-201ENST00000616429 682 ntBASIC26.41■■□□□ 1.82
LRRTM3Q86VH5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LRRTM3Q86VH5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LRRTM3Q86VH5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
LRRTM3Q86VH5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.39■■□□□ 1.82
LRRTM3Q86VH5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.39■■□□□ 1.82
LRRTM3Q86VH5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LRRTM3Q86VH5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
LRRTM3Q86VH5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LRRTM3Q86VH5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.38■■□□□ 1.81
LRRTM3Q86VH5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LRRTM3Q86VH5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LRRTM3Q86VH5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
LRRTM3Q86VH5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LRRTM3Q86VH5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LRRTM3Q86VH5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LRRTM3Q86VH5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LRRTM3Q86VH5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.35■■□□□ 1.81
LRRTM3Q86VH5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
LRRTM3Q86VH5 SMPD5-203ENST00000639008 1464 ntBASIC26.35■■□□□ 1.81
LRRTM3Q86VH5 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LRRTM3Q86VH5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.34■■□□□ 1.81
LRRTM3Q86VH5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LRRTM3Q86VH5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LRRTM3Q86VH5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
LRRTM3Q86VH5 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
LRRTM3Q86VH5 AC025884.2-201ENST00000553429 711 ntBASIC26.33■■□□□ 1.81
LRRTM3Q86VH5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
LRRTM3Q86VH5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.32■■□□□ 1.8
LRRTM3Q86VH5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
LRRTM3Q86VH5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
LRRTM3Q86VH5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms