Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAI1Q7Z5J4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.55■■□□□ 1.04
RAI1Q7Z5J4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
RAI1Q7Z5J4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RAI1Q7Z5J4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAI1Q7Z5J4 AC004987.1-201ENST00000428627 508 ntBASIC21.55■■□□□ 1.04
RAI1Q7Z5J4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RAI1Q7Z5J4 AP004833.2-201ENST00000532228 1454 ntBASIC21.54■■□□□ 1.04
RAI1Q7Z5J4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAI1Q7Z5J4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAI1Q7Z5J4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.54■■□□□ 1.04
RAI1Q7Z5J4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAI1Q7Z5J4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAI1Q7Z5J4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.54■■□□□ 1.04
RAI1Q7Z5J4 AL139393.2-201ENST00000608721 2025 ntBASIC21.54■■□□□ 1.04
RAI1Q7Z5J4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.53■■□□□ 1.04
RAI1Q7Z5J4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAI1Q7Z5J4 AC126177.7-201ENST00000547904 679 ntBASIC21.53■■□□□ 1.04
RAI1Q7Z5J4 AC007029.1-201ENST00000604183 313 ntBASIC21.53■■□□□ 1.04
RAI1Q7Z5J4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAI1Q7Z5J4 AC100797.4-201ENST00000631653 1827 ntBASIC21.53■■□□□ 1.04
RAI1Q7Z5J4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAI1Q7Z5J4 AC025884.2-201ENST00000553429 711 ntBASIC21.53■■□□□ 1.04
RAI1Q7Z5J4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RAI1Q7Z5J4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.52■■□□□ 1.04
RAI1Q7Z5J4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAI1Q7Z5J4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAI1Q7Z5J4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAI1Q7Z5J4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.51■■□□□ 1.03
RAI1Q7Z5J4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RAI1Q7Z5J4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAI1Q7Z5J4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAI1Q7Z5J4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.51■■□□□ 1.03
RAI1Q7Z5J4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAI1Q7Z5J4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.51■■□□□ 1.03
RAI1Q7Z5J4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
RAI1Q7Z5J4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAI1Q7Z5J4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.51■■□□□ 1.03
RAI1Q7Z5J4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.51■■□□□ 1.03
RAI1Q7Z5J4 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.5■■□□□ 1.03
RAI1Q7Z5J4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.49■■□□□ 1.03
RAI1Q7Z5J4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAI1Q7Z5J4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAI1Q7Z5J4 ATP5G2P3-201ENST00000429083 425 ntBASIC21.49■■□□□ 1.03
RAI1Q7Z5J4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.49■■□□□ 1.03
RAI1Q7Z5J4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAI1Q7Z5J4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.49■■□□□ 1.03
RAI1Q7Z5J4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAI1Q7Z5J4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.49■■□□□ 1.03
RAI1Q7Z5J4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAI1Q7Z5J4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAI1Q7Z5J4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.48■■□□□ 1.03
RAI1Q7Z5J4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.48■■□□□ 1.03
RAI1Q7Z5J4 AL592293.1-201ENST00000502889 1188 ntBASIC21.48■■□□□ 1.03
RAI1Q7Z5J4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RAI1Q7Z5J4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RAI1Q7Z5J4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAI1Q7Z5J4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAI1Q7Z5J4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RAI1Q7Z5J4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.47■■□□□ 1.03
RAI1Q7Z5J4 AC129492.7-201ENST00000622992 756 ntBASIC21.47■■□□□ 1.03
RAI1Q7Z5J4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RAI1Q7Z5J4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RAI1Q7Z5J4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.46■■□□□ 1.03
RAI1Q7Z5J4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.46■■□□□ 1.03
RAI1Q7Z5J4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.45■■□□□ 1.02
RAI1Q7Z5J4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAI1Q7Z5J4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAI1Q7Z5J4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAI1Q7Z5J4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.45■■□□□ 1.02
RAI1Q7Z5J4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAI1Q7Z5J4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAI1Q7Z5J4 RARRES2P1-201ENST00000474487 481 ntBASIC21.45■■□□□ 1.02
RAI1Q7Z5J4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAI1Q7Z5J4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAI1Q7Z5J4 AC009831.1-201ENST00000580420 1582 ntBASIC21.44■■□□□ 1.02
RAI1Q7Z5J4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAI1Q7Z5J4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAI1Q7Z5J4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
RAI1Q7Z5J4 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.43■■□□□ 1.02
RAI1Q7Z5J4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
RAI1Q7Z5J4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAI1Q7Z5J4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
RAI1Q7Z5J4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAI1Q7Z5J4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.41■■□□□ 1.02
RAI1Q7Z5J4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAI1Q7Z5J4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAI1Q7Z5J4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAI1Q7Z5J4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAI1Q7Z5J4 DRD5P2-201ENST00000421395 2012 ntBASIC21.41■■□□□ 1.02
RAI1Q7Z5J4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.4■■□□□ 1.02
RAI1Q7Z5J4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.4■■□□□ 1.02
RAI1Q7Z5J4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAI1Q7Z5J4 AC133552.2-201ENST00000619106 1032 ntBASIC21.4■■□□□ 1.02
RAI1Q7Z5J4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAI1Q7Z5J4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAI1Q7Z5J4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAI1Q7Z5J4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.4■■□□□ 1.02
RAI1Q7Z5J4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RAI1Q7Z5J4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms