Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SHC4Q6S5L8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SHC4Q6S5L8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SHC4Q6S5L8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.24■■■□□ 2.11
SHC4Q6S5L8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
SHC4Q6S5L8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SHC4Q6S5L8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SHC4Q6S5L8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.23■■■□□ 2.11
SHC4Q6S5L8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.23■■■□□ 2.11
SHC4Q6S5L8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.22■■■□□ 2.11
SHC4Q6S5L8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SHC4Q6S5L8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SHC4Q6S5L8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.2■■■□□ 2.11
SHC4Q6S5L8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SHC4Q6S5L8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
SHC4Q6S5L8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
SHC4Q6S5L8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.2■■■□□ 2.1
SHC4Q6S5L8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
SHC4Q6S5L8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SHC4Q6S5L8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SHC4Q6S5L8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.2■■■□□ 2.1
SHC4Q6S5L8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
SHC4Q6S5L8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SHC4Q6S5L8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.19■■■□□ 2.1
SHC4Q6S5L8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.19■■■□□ 2.1
SHC4Q6S5L8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.18■■■□□ 2.1
SHC4Q6S5L8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
SHC4Q6S5L8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.18■■■□□ 2.1
SHC4Q6S5L8 AC091060.1-201ENST00000623524 1766 ntBASIC28.17■■■□□ 2.1
SHC4Q6S5L8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.17■■■□□ 2.1
SHC4Q6S5L8 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.17■■■□□ 2.1
SHC4Q6S5L8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.17■■■□□ 2.1
SHC4Q6S5L8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.16■■■□□ 2.1
SHC4Q6S5L8 LINC01971-201ENST00000617888 1048 ntBASIC28.16■■■□□ 2.1
SHC4Q6S5L8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
SHC4Q6S5L8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SHC4Q6S5L8 AP004609.3-201ENST00000610705 1884 ntBASIC28.15■■■□□ 2.1
SHC4Q6S5L8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
SHC4Q6S5L8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SHC4Q6S5L8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.14■■■□□ 2.09
SHC4Q6S5L8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SHC4Q6S5L8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.13■■■□□ 2.09
SHC4Q6S5L8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
SHC4Q6S5L8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SHC4Q6S5L8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.12■■■□□ 2.09
SHC4Q6S5L8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
SHC4Q6S5L8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SHC4Q6S5L8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SHC4Q6S5L8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.11■■■□□ 2.09
SHC4Q6S5L8 WHAMMP3-201ENST00000611636 1609 ntBASIC28.1■■■□□ 2.09
SHC4Q6S5L8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.1■■■□□ 2.09
SHC4Q6S5L8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SHC4Q6S5L8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
SHC4Q6S5L8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SHC4Q6S5L8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SHC4Q6S5L8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.08■■■□□ 2.09
SHC4Q6S5L8 DUX4L13-201ENST00000554103 1267 ntBASIC28.08■■■□□ 2.09
SHC4Q6S5L8 DUX4L15-201ENST00000611059 1267 ntBASIC28.08■■■□□ 2.09
SHC4Q6S5L8 DUX4L23-201ENST00000615195 1269 ntBASIC28.08■■■□□ 2.09
SHC4Q6S5L8 DUX4L24-201ENST00000617576 1269 ntBASIC28.08■■■□□ 2.09
SHC4Q6S5L8 DUX4L22-201ENST00000618238 1269 ntBASIC28.08■■■□□ 2.09
SHC4Q6S5L8 DUX4L20-201ENST00000619712 1269 ntBASIC28.08■■■□□ 2.09
SHC4Q6S5L8 DUX4L21-201ENST00000622058 1269 ntBASIC28.08■■■□□ 2.09
SHC4Q6S5L8 DUX4L10-201ENST00000622460 1267 ntBASIC28.08■■■□□ 2.09
SHC4Q6S5L8 DUX4L25-201ENST00000624915 1269 ntBASIC28.08■■■□□ 2.09
SHC4Q6S5L8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
SHC4Q6S5L8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.06■■■□□ 2.08
SHC4Q6S5L8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
SHC4Q6S5L8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
SHC4Q6S5L8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SHC4Q6S5L8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.04■■■□□ 2.08
SHC4Q6S5L8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SHC4Q6S5L8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SHC4Q6S5L8 DUX4L11-201ENST00000611504 1267 ntBASIC28.04■■■□□ 2.08
SHC4Q6S5L8 DUX4L12-201ENST00000614593 1267 ntBASIC28.04■■■□□ 2.08
SHC4Q6S5L8 DUX4L14-201ENST00000621227 1267 ntBASIC28.04■■■□□ 2.08
SHC4Q6S5L8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.04■■■□□ 2.08
SHC4Q6S5L8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SHC4Q6S5L8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SHC4Q6S5L8 AC142472.1-201ENST00000612013 1741 ntBASIC28.04■■■□□ 2.08
SHC4Q6S5L8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SHC4Q6S5L8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
SHC4Q6S5L8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
SHC4Q6S5L8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SHC4Q6S5L8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SHC4Q6S5L8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.02■■■□□ 2.08
SHC4Q6S5L8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.02■■■□□ 2.08
SHC4Q6S5L8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SHC4Q6S5L8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.01■■■□□ 2.07
SHC4Q6S5L8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SHC4Q6S5L8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28■■■□□ 2.07
SHC4Q6S5L8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28■■■□□ 2.07
SHC4Q6S5L8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28■■■□□ 2.07
SHC4Q6S5L8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
SHC4Q6S5L8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28■■■□□ 2.07
SHC4Q6S5L8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.99■■■□□ 2.07
SHC4Q6S5L8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.99■■■□□ 2.07
SHC4Q6S5L8 ZNRF2P2-203ENST00000454624 420 ntBASIC27.99■■■□□ 2.07
SHC4Q6S5L8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.99■■■□□ 2.07
SHC4Q6S5L8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.99■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms