Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 DUX4L25-201ENST00000624915 1269 ntBASIC27.36■■□□□ 1.97
FOXR2Q6PJQ5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.36■■□□□ 1.97
FOXR2Q6PJQ5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
FOXR2Q6PJQ5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
FOXR2Q6PJQ5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
FOXR2Q6PJQ5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.35■■□□□ 1.97
FOXR2Q6PJQ5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.35■■□□□ 1.97
FOXR2Q6PJQ5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
FOXR2Q6PJQ5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
FOXR2Q6PJQ5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.34■■□□□ 1.97
FOXR2Q6PJQ5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
FOXR2Q6PJQ5 WHAMMP3-201ENST00000611636 1609 ntBASIC27.33■■□□□ 1.97
FOXR2Q6PJQ5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.33■■□□□ 1.97
FOXR2Q6PJQ5 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
FOXR2Q6PJQ5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.32■■□□□ 1.96
FOXR2Q6PJQ5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.31■■□□□ 1.96
FOXR2Q6PJQ5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
FOXR2Q6PJQ5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.31■■□□□ 1.96
FOXR2Q6PJQ5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.3■■□□□ 1.96
FOXR2Q6PJQ5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
FOXR2Q6PJQ5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
FOXR2Q6PJQ5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
FOXR2Q6PJQ5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
FOXR2Q6PJQ5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
FOXR2Q6PJQ5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.29■■□□□ 1.96
FOXR2Q6PJQ5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
FOXR2Q6PJQ5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
FOXR2Q6PJQ5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
FOXR2Q6PJQ5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.29■■□□□ 1.96
FOXR2Q6PJQ5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
FOXR2Q6PJQ5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.28■■□□□ 1.96
FOXR2Q6PJQ5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
FOXR2Q6PJQ5 AC008813.1-201ENST00000536597 885 ntBASIC27.28■■□□□ 1.96
FOXR2Q6PJQ5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
FOXR2Q6PJQ5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
FOXR2Q6PJQ5 AC142472.1-201ENST00000612013 1741 ntBASIC27.27■■□□□ 1.96
FOXR2Q6PJQ5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.27■■□□□ 1.96
FOXR2Q6PJQ5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
FOXR2Q6PJQ5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
FOXR2Q6PJQ5 DUX4L11-201ENST00000611504 1267 ntBASIC27.26■■□□□ 1.95
FOXR2Q6PJQ5 DUX4L12-201ENST00000614593 1267 ntBASIC27.26■■□□□ 1.95
FOXR2Q6PJQ5 DUX4L14-201ENST00000621227 1267 ntBASIC27.26■■□□□ 1.95
FOXR2Q6PJQ5 AP004609.3-201ENST00000610705 1884 ntBASIC27.25■■□□□ 1.95
FOXR2Q6PJQ5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
FOXR2Q6PJQ5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.25■■□□□ 1.95
FOXR2Q6PJQ5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
FOXR2Q6PJQ5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.24■■□□□ 1.95
FOXR2Q6PJQ5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.23■■□□□ 1.95
FOXR2Q6PJQ5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
FOXR2Q6PJQ5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
FOXR2Q6PJQ5 AC148477.6-201ENST00000623746 465 ntBASIC27.23■■□□□ 1.95
FOXR2Q6PJQ5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
FOXR2Q6PJQ5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
FOXR2Q6PJQ5 AC091060.1-201ENST00000623524 1766 ntBASIC27.22■■□□□ 1.95
FOXR2Q6PJQ5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
FOXR2Q6PJQ5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
FOXR2Q6PJQ5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.22■■□□□ 1.95
FOXR2Q6PJQ5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
FOXR2Q6PJQ5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
FOXR2Q6PJQ5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
FOXR2Q6PJQ5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
FOXR2Q6PJQ5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
FOXR2Q6PJQ5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
FOXR2Q6PJQ5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.21■■□□□ 1.95
FOXR2Q6PJQ5 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.21■■□□□ 1.95
FOXR2Q6PJQ5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
FOXR2Q6PJQ5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.95
FOXR2Q6PJQ5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
FOXR2Q6PJQ5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
FOXR2Q6PJQ5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.2■■□□□ 1.94
FOXR2Q6PJQ5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
FOXR2Q6PJQ5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
FOXR2Q6PJQ5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
FOXR2Q6PJQ5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
FOXR2Q6PJQ5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
FOXR2Q6PJQ5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
FOXR2Q6PJQ5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FOXR2Q6PJQ5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FOXR2Q6PJQ5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.18■■□□□ 1.94
FOXR2Q6PJQ5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FOXR2Q6PJQ5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FOXR2Q6PJQ5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
FOXR2Q6PJQ5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
FOXR2Q6PJQ5 ZNRF2P2-203ENST00000454624 420 ntBASIC27.17■■□□□ 1.94
FOXR2Q6PJQ5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
FOXR2Q6PJQ5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
FOXR2Q6PJQ5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.16■■□□□ 1.94
FOXR2Q6PJQ5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
FOXR2Q6PJQ5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
FOXR2Q6PJQ5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
FOXR2Q6PJQ5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
FOXR2Q6PJQ5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
FOXR2Q6PJQ5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.15■■□□□ 1.94
FOXR2Q6PJQ5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
FOXR2Q6PJQ5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
FOXR2Q6PJQ5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
FOXR2Q6PJQ5 AC145676.1-201ENST00000514988 2004 ntBASIC27.14■■□□□ 1.94
FOXR2Q6PJQ5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.14■■□□□ 1.94
FOXR2Q6PJQ5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
FOXR2Q6PJQ5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.14■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms