Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CNKSR3Q6P9H4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.39■■□□□ 1.97
CNKSR3Q6P9H4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CNKSR3Q6P9H4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CNKSR3Q6P9H4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.37■■□□□ 1.97
CNKSR3Q6P9H4 AC100797.4-201ENST00000631653 1827 ntBASIC27.37■■□□□ 1.97
CNKSR3Q6P9H4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CNKSR3Q6P9H4 RP9P-202ENST00000450133 1212 ntBASIC27.37■■□□□ 1.97
CNKSR3Q6P9H4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CNKSR3Q6P9H4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
CNKSR3Q6P9H4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.36■■□□□ 1.97
CNKSR3Q6P9H4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CNKSR3Q6P9H4 DUX4L9-201ENST00000449051 1259 ntBASIC27.36■■□□□ 1.97
CNKSR3Q6P9H4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.36■■□□□ 1.97
CNKSR3Q6P9H4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.36■■□□□ 1.97
CNKSR3Q6P9H4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CNKSR3Q6P9H4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CNKSR3Q6P9H4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.34■■□□□ 1.97
CNKSR3Q6P9H4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
CNKSR3Q6P9H4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.34■■□□□ 1.97
CNKSR3Q6P9H4 AC093536.1-201ENST00000569153 554 ntBASIC27.33■■□□□ 1.97
CNKSR3Q6P9H4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC27.33■■□□□ 1.97
CNKSR3Q6P9H4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CNKSR3Q6P9H4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.96
CNKSR3Q6P9H4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.32■■□□□ 1.96
CNKSR3Q6P9H4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.32■■□□□ 1.96
CNKSR3Q6P9H4 ST7-AS1-201ENST00000456775 1889 ntBASIC27.32■■□□□ 1.96
CNKSR3Q6P9H4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.32■■□□□ 1.96
CNKSR3Q6P9H4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CNKSR3Q6P9H4 BHLHE23-202ENST00000612929 1109 ntBASIC27.31■■□□□ 1.96
CNKSR3Q6P9H4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.3■■□□□ 1.96
CNKSR3Q6P9H4 RAP2CP1-202ENST00000605179 643 ntBASIC27.3■■□□□ 1.96
CNKSR3Q6P9H4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CNKSR3Q6P9H4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
CNKSR3Q6P9H4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CNKSR3Q6P9H4 AC074183.2-201ENST00000623112 922 ntBASIC27.29■■□□□ 1.96
CNKSR3Q6P9H4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.29■■□□□ 1.96
CNKSR3Q6P9H4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CNKSR3Q6P9H4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.29■■□□□ 1.96
CNKSR3Q6P9H4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.28■■□□□ 1.96
CNKSR3Q6P9H4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CNKSR3Q6P9H4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.27■■□□□ 1.96
CNKSR3Q6P9H4 AC010980.1-201ENST00000587192 1142 ntBASIC27.27■■□□□ 1.96
CNKSR3Q6P9H4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CNKSR3Q6P9H4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.26■■□□□ 1.95
CNKSR3Q6P9H4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CNKSR3Q6P9H4 SPCS2P3-201ENST00000500401 656 ntBASIC27.26■■□□□ 1.95
CNKSR3Q6P9H4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC27.26■■□□□ 1.95
CNKSR3Q6P9H4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CNKSR3Q6P9H4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
CNKSR3Q6P9H4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CNKSR3Q6P9H4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
CNKSR3Q6P9H4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CNKSR3Q6P9H4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CNKSR3Q6P9H4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.24■■□□□ 1.95
CNKSR3Q6P9H4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
CNKSR3Q6P9H4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.24■■□□□ 1.95
CNKSR3Q6P9H4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.24■■□□□ 1.95
CNKSR3Q6P9H4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.24■■□□□ 1.95
CNKSR3Q6P9H4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
CNKSR3Q6P9H4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.24■■□□□ 1.95
CNKSR3Q6P9H4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CNKSR3Q6P9H4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.23■■□□□ 1.95
CNKSR3Q6P9H4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CNKSR3Q6P9H4 MIR3960-201ENST00000583311 91 ntBASIC27.23■■□□□ 1.95
CNKSR3Q6P9H4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
CNKSR3Q6P9H4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CNKSR3Q6P9H4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
CNKSR3Q6P9H4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CNKSR3Q6P9H4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
CNKSR3Q6P9H4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CNKSR3Q6P9H4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CNKSR3Q6P9H4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CNKSR3Q6P9H4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CNKSR3Q6P9H4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CNKSR3Q6P9H4 AC139795.1-202ENST00000500444 432 ntBASIC27.21■■□□□ 1.95
CNKSR3Q6P9H4 KRT8P33-201ENST00000508125 1423 ntBASIC27.21■■□□□ 1.95
CNKSR3Q6P9H4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.21■■□□□ 1.95
CNKSR3Q6P9H4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CNKSR3Q6P9H4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.2■■□□□ 1.94
CNKSR3Q6P9H4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CNKSR3Q6P9H4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.2■■□□□ 1.94
CNKSR3Q6P9H4 MIR6765-201ENST00000614092 87 ntBASIC27.2■■□□□ 1.94
CNKSR3Q6P9H4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.19■■□□□ 1.94
CNKSR3Q6P9H4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.19■■□□□ 1.94
CNKSR3Q6P9H4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
CNKSR3Q6P9H4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CNKSR3Q6P9H4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
CNKSR3Q6P9H4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CNKSR3Q6P9H4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.17■■□□□ 1.94
CNKSR3Q6P9H4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.17■■□□□ 1.94
CNKSR3Q6P9H4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.16■■□□□ 1.94
CNKSR3Q6P9H4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CNKSR3Q6P9H4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CNKSR3Q6P9H4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.16■■□□□ 1.94
CNKSR3Q6P9H4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC27.15■■□□□ 1.94
CNKSR3Q6P9H4 YBX1P4-201ENST00000392794 808 ntBASIC27.15■■□□□ 1.94
CNKSR3Q6P9H4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC27.15■■□□□ 1.94
CNKSR3Q6P9H4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CNKSR3Q6P9H4 AC009299.2-201ENST00000482477 511 ntBASIC27.15■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms