Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.2■□□□□ 0.99
UBA52P62987 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBA52P62987 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.2■□□□□ 0.98
UBA52P62987 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.2■□□□□ 0.98
UBA52P62987 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBA52P62987 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
UBA52P62987 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBA52P62987 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBA52P62987 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBA52P62987 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UBA52P62987 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.18■□□□□ 0.98
UBA52P62987 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBA52P62987 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
UBA52P62987 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
UBA52P62987 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBA52P62987 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBA52P62987 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBA52P62987 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBA52P62987 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
UBA52P62987 AC093323.1-202ENST00000635031 2045 ntBASIC21.17■□□□□ 0.98
UBA52P62987 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBA52P62987 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
UBA52P62987 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.16■□□□□ 0.98
UBA52P62987 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBA52P62987 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
UBA52P62987 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBA52P62987 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.16■□□□□ 0.98
UBA52P62987 DUX4L13-201ENST00000554103 1267 ntBASIC21.16■□□□□ 0.98
UBA52P62987 DUX4L15-201ENST00000611059 1267 ntBASIC21.16■□□□□ 0.98
UBA52P62987 DUX4L23-201ENST00000615195 1269 ntBASIC21.16■□□□□ 0.98
UBA52P62987 DUX4L24-201ENST00000617576 1269 ntBASIC21.16■□□□□ 0.98
UBA52P62987 DUX4L22-201ENST00000618238 1269 ntBASIC21.16■□□□□ 0.98
UBA52P62987 DUX4L20-201ENST00000619712 1269 ntBASIC21.16■□□□□ 0.98
UBA52P62987 DUX4L21-201ENST00000622058 1269 ntBASIC21.16■□□□□ 0.98
UBA52P62987 DUX4L10-201ENST00000622460 1267 ntBASIC21.16■□□□□ 0.98
UBA52P62987 DUX4L25-201ENST00000624915 1269 ntBASIC21.16■□□□□ 0.98
UBA52P62987 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.16■□□□□ 0.98
UBA52P62987 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBA52P62987 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBA52P62987 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBA52P62987 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.15■□□□□ 0.98
UBA52P62987 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBA52P62987 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBA52P62987 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
UBA52P62987 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBA52P62987 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBA52P62987 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.14■□□□□ 0.98
UBA52P62987 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBA52P62987 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBA52P62987 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.14■□□□□ 0.97
UBA52P62987 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBA52P62987 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBA52P62987 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBA52P62987 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.14■□□□□ 0.97
UBA52P62987 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
UBA52P62987 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBA52P62987 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBA52P62987 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.13■□□□□ 0.97
UBA52P62987 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBA52P62987 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.13■□□□□ 0.97
UBA52P62987 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBA52P62987 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.12■□□□□ 0.97
UBA52P62987 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
UBA52P62987 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBA52P62987 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBA52P62987 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBA52P62987 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.12■□□□□ 0.97
UBA52P62987 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBA52P62987 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBA52P62987 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBA52P62987 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.11■□□□□ 0.97
UBA52P62987 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.11■□□□□ 0.97
UBA52P62987 AC020928.2-201ENST00000588717 2197 ntBASIC21.11■□□□□ 0.97
UBA52P62987 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.11■□□□□ 0.97
UBA52P62987 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
UBA52P62987 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.1■□□□□ 0.97
UBA52P62987 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.1■□□□□ 0.97
UBA52P62987 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.1■□□□□ 0.97
UBA52P62987 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBA52P62987 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.09■□□□□ 0.97
UBA52P62987 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBA52P62987 AC091060.1-201ENST00000623524 1766 ntBASIC21.08■□□□□ 0.97
UBA52P62987 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBA52P62987 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBA52P62987 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.08■□□□□ 0.97
UBA52P62987 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
UBA52P62987 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBA52P62987 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
UBA52P62987 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBA52P62987 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.08■□□□□ 0.96
UBA52P62987 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.07■□□□□ 0.96
UBA52P62987 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.07■□□□□ 0.96
UBA52P62987 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBA52P62987 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBA52P62987 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBA52P62987 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
UBA52P62987 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBA52P62987 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.05■□□□□ 0.96
UBA52P62987 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBA52P62987 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms