Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SEC61A1P61619 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEC61A1P61619 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEC61A1P61619 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEC61A1P61619 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.53■■□□□ 1.04
SEC61A1P61619 BX255925.1-201ENST00000566954 1854 ntBASIC21.53■■□□□ 1.04
SEC61A1P61619 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEC61A1P61619 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEC61A1P61619 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SEC61A1P61619 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SEC61A1P61619 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SEC61A1P61619 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SEC61A1P61619 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.52■■□□□ 1.04
SEC61A1P61619 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.52■■□□□ 1.04
SEC61A1P61619 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SEC61A1P61619 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SEC61A1P61619 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEC61A1P61619 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEC61A1P61619 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SEC61A1P61619 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.51■■□□□ 1.03
SEC61A1P61619 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SEC61A1P61619 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SEC61A1P61619 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SEC61A1P61619 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SEC61A1P61619 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.5■■□□□ 1.03
SEC61A1P61619 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.5■■□□□ 1.03
SEC61A1P61619 DUX4L13-201ENST00000554103 1267 ntBASIC21.5■■□□□ 1.03
SEC61A1P61619 DUX4L15-201ENST00000611059 1267 ntBASIC21.5■■□□□ 1.03
SEC61A1P61619 DUX4L23-201ENST00000615195 1269 ntBASIC21.5■■□□□ 1.03
SEC61A1P61619 DUX4L24-201ENST00000617576 1269 ntBASIC21.5■■□□□ 1.03
SEC61A1P61619 DUX4L22-201ENST00000618238 1269 ntBASIC21.5■■□□□ 1.03
SEC61A1P61619 DUX4L20-201ENST00000619712 1269 ntBASIC21.5■■□□□ 1.03
SEC61A1P61619 DUX4L21-201ENST00000622058 1269 ntBASIC21.5■■□□□ 1.03
SEC61A1P61619 DUX4L10-201ENST00000622460 1267 ntBASIC21.5■■□□□ 1.03
SEC61A1P61619 DUX4L25-201ENST00000624915 1269 ntBASIC21.5■■□□□ 1.03
SEC61A1P61619 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SEC61A1P61619 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SEC61A1P61619 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SEC61A1P61619 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SEC61A1P61619 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SEC61A1P61619 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SEC61A1P61619 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.49■■□□□ 1.03
SEC61A1P61619 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.49■■□□□ 1.03
SEC61A1P61619 AP004833.2-201ENST00000532228 1454 ntBASIC21.49■■□□□ 1.03
SEC61A1P61619 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SEC61A1P61619 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.48■■□□□ 1.03
SEC61A1P61619 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.48■■□□□ 1.03
SEC61A1P61619 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.48■■□□□ 1.03
SEC61A1P61619 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
SEC61A1P61619 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.47■■□□□ 1.03
SEC61A1P61619 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.47■■□□□ 1.03
SEC61A1P61619 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.47■■□□□ 1.03
SEC61A1P61619 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SEC61A1P61619 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SEC61A1P61619 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SEC61A1P61619 MIR639-201ENST00000384974 98 ntBASIC21.47■■□□□ 1.03
SEC61A1P61619 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SEC61A1P61619 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SEC61A1P61619 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.47■■□□□ 1.03
SEC61A1P61619 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SEC61A1P61619 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.46■■□□□ 1.03
SEC61A1P61619 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SEC61A1P61619 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SEC61A1P61619 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.46■■□□□ 1.03
SEC61A1P61619 WHAMMP2-203ENST00000563942 1603 ntBASIC21.46■■□□□ 1.03
SEC61A1P61619 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.46■■□□□ 1.03
SEC61A1P61619 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SEC61A1P61619 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.45■■□□□ 1.02
SEC61A1P61619 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.45■■□□□ 1.02
SEC61A1P61619 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
SEC61A1P61619 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.45■■□□□ 1.02
SEC61A1P61619 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SEC61A1P61619 AC135983.2-203ENST00000454486 1613 ntBASIC21.44■■□□□ 1.02
SEC61A1P61619 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SEC61A1P61619 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SEC61A1P61619 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SEC61A1P61619 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEC61A1P61619 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SEC61A1P61619 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEC61A1P61619 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEC61A1P61619 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SEC61A1P61619 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.43■■□□□ 1.02
SEC61A1P61619 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEC61A1P61619 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEC61A1P61619 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEC61A1P61619 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEC61A1P61619 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEC61A1P61619 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SEC61A1P61619 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SEC61A1P61619 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SEC61A1P61619 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SEC61A1P61619 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.42■■□□□ 1.02
SEC61A1P61619 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SEC61A1P61619 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
SEC61A1P61619 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SEC61A1P61619 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SEC61A1P61619 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SEC61A1P61619 MIR4449-201ENST00000578365 66 ntBASIC21.41■■□□□ 1.02
SEC61A1P61619 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.41■■□□□ 1.02
SEC61A1P61619 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms