Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CLDN6P56747 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CLDN6P56747 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CLDN6P56747 DUX4L9-201ENST00000449051 1259 ntBASIC24.18■■□□□ 1.46
CLDN6P56747 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
CLDN6P56747 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CLDN6P56747 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLDN6P56747 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLDN6P56747 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CLDN6P56747 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.16■■□□□ 1.46
CLDN6P56747 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLDN6P56747 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.16■■□□□ 1.46
CLDN6P56747 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.16■■□□□ 1.46
CLDN6P56747 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.16■■□□□ 1.46
CLDN6P56747 AC100797.4-201ENST00000631653 1827 ntBASIC24.16■■□□□ 1.46
CLDN6P56747 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLDN6P56747 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.16■■□□□ 1.46
CLDN6P56747 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLDN6P56747 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLDN6P56747 SPCS2P3-201ENST00000500401 656 ntBASIC24.15■■□□□ 1.46
CLDN6P56747 BHLHE23-202ENST00000612929 1109 ntBASIC24.15■■□□□ 1.46
CLDN6P56747 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CLDN6P56747 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.14■■□□□ 1.46
CLDN6P56747 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.14■■□□□ 1.45
CLDN6P56747 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.14■■□□□ 1.45
CLDN6P56747 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CLDN6P56747 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.14■■□□□ 1.45
CLDN6P56747 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.13■■□□□ 1.45
CLDN6P56747 AL592295.1-201ENST00000400984 884 ntBASIC24.13■■□□□ 1.45
CLDN6P56747 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLDN6P56747 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CLDN6P56747 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CLDN6P56747 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLDN6P56747 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLDN6P56747 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.11■■□□□ 1.45
CLDN6P56747 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLDN6P56747 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.11■■□□□ 1.45
CLDN6P56747 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
CLDN6P56747 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
CLDN6P56747 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CLDN6P56747 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.1■■□□□ 1.45
CLDN6P56747 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLDN6P56747 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLDN6P56747 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLDN6P56747 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
CLDN6P56747 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLDN6P56747 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CLDN6P56747 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLDN6P56747 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.09■■□□□ 1.45
CLDN6P56747 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.08■■□□□ 1.45
CLDN6P56747 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CLDN6P56747 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.08■■□□□ 1.45
CLDN6P56747 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.08■■□□□ 1.45
CLDN6P56747 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CLDN6P56747 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CLDN6P56747 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
CLDN6P56747 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLDN6P56747 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.07■■□□□ 1.44
CLDN6P56747 AC093536.1-201ENST00000569153 554 ntBASIC24.07■■□□□ 1.44
CLDN6P56747 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.07■■□□□ 1.44
CLDN6P56747 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.07■■□□□ 1.44
CLDN6P56747 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.07■■□□□ 1.44
CLDN6P56747 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CLDN6P56747 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLDN6P56747 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLDN6P56747 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CLDN6P56747 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.05■■□□□ 1.44
CLDN6P56747 AC025884.2-201ENST00000553429 711 ntBASIC24.05■■□□□ 1.44
CLDN6P56747 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLDN6P56747 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLDN6P56747 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLDN6P56747 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.04■■□□□ 1.44
CLDN6P56747 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLDN6P56747 RP9P-202ENST00000450133 1212 ntBASIC24.04■■□□□ 1.44
CLDN6P56747 AC009299.2-201ENST00000482477 511 ntBASIC24.04■■□□□ 1.44
CLDN6P56747 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLDN6P56747 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.04■■□□□ 1.44
CLDN6P56747 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CLDN6P56747 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CLDN6P56747 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLDN6P56747 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.03■■□□□ 1.44
CLDN6P56747 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.03■■□□□ 1.44
CLDN6P56747 RAP2CP1-202ENST00000605179 643 ntBASIC24.02■■□□□ 1.44
CLDN6P56747 PVT1_1.1-201ENST00000615125 194 ntBASIC24.02■■□□□ 1.44
CLDN6P56747 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CLDN6P56747 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLDN6P56747 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLDN6P56747 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.01■■□□□ 1.43
CLDN6P56747 AC103834.1-201ENST00000520383 144 ntBASIC24.01■■□□□ 1.43
CLDN6P56747 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
CLDN6P56747 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24■■□□□ 1.43
CLDN6P56747 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLDN6P56747 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CLDN6P56747 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
CLDN6P56747 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24■■□□□ 1.43
CLDN6P56747 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
CLDN6P56747 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24■■□□□ 1.43
CLDN6P56747 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CLDN6P56747 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CLDN6P56747 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms