Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
PDX1P52945 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PDX1P52945 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDX1P52945 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.29■■□□□ 1.48
PDX1P52945 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDX1P52945 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDX1P52945 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.29■■□□□ 1.48
PDX1P52945 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.28■■□□□ 1.48
PDX1P52945 AC004987.1-201ENST00000428627 508 ntBASIC24.28■■□□□ 1.48
PDX1P52945 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
PDX1P52945 TSPY13P-201ENST00000338964 914 ntBASIC24.27■■□□□ 1.48
PDX1P52945 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDX1P52945 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.27■■□□□ 1.48
PDX1P52945 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PDX1P52945 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDX1P52945 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDX1P52945 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDX1P52945 ATP5G2P3-201ENST00000429083 425 ntBASIC24.26■■□□□ 1.47
PDX1P52945 AC126177.7-201ENST00000547904 679 ntBASIC24.26■■□□□ 1.47
PDX1P52945 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PDX1P52945 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDX1P52945 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.25■■□□□ 1.47
PDX1P52945 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDX1P52945 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PDX1P52945 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.25■■□□□ 1.47
PDX1P52945 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDX1P52945 AL139393.2-201ENST00000608721 2025 ntBASIC24.25■■□□□ 1.47
PDX1P52945 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.24■■□□□ 1.47
PDX1P52945 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDX1P52945 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PDX1P52945 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.23■■□□□ 1.47
PDX1P52945 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
PDX1P52945 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.23■■□□□ 1.47
PDX1P52945 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.22■■□□□ 1.47
PDX1P52945 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDX1P52945 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDX1P52945 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDX1P52945 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.22■■□□□ 1.47
PDX1P52945 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDX1P52945 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PDX1P52945 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
PDX1P52945 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.21■■□□□ 1.47
PDX1P52945 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PDX1P52945 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDX1P52945 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.21■■□□□ 1.47
PDX1P52945 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDX1P52945 AP004833.2-201ENST00000532228 1454 ntBASIC24.2■■□□□ 1.47
PDX1P52945 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PDX1P52945 AC100797.4-201ENST00000631653 1827 ntBASIC24.19■■□□□ 1.46
PDX1P52945 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.19■■□□□ 1.46
PDX1P52945 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDX1P52945 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDX1P52945 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PDX1P52945 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.17■■□□□ 1.46
PDX1P52945 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PDX1P52945 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.17■■□□□ 1.46
PDX1P52945 AC007029.1-201ENST00000604183 313 ntBASIC24.17■■□□□ 1.46
PDX1P52945 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDX1P52945 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDX1P52945 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDX1P52945 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.16■■□□□ 1.46
PDX1P52945 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.16■■□□□ 1.46
PDX1P52945 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDX1P52945 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDX1P52945 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PDX1P52945 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.15■■□□□ 1.46
PDX1P52945 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PDX1P52945 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PDX1P52945 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PDX1P52945 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.14■■□□□ 1.45
PDX1P52945 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PDX1P52945 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDX1P52945 RARRES2P1-201ENST00000474487 481 ntBASIC24.13■■□□□ 1.45
PDX1P52945 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDX1P52945 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.13■■□□□ 1.45
PDX1P52945 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDX1P52945 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.12■■□□□ 1.45
PDX1P52945 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PDX1P52945 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
PDX1P52945 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
PDX1P52945 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDX1P52945 AC129492.7-201ENST00000622992 756 ntBASIC24.12■■□□□ 1.45
PDX1P52945 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.12■■□□□ 1.45
PDX1P52945 AC009831.1-201ENST00000580420 1582 ntBASIC24.12■■□□□ 1.45
PDX1P52945 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDX1P52945 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.11■■□□□ 1.45
PDX1P52945 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.11■■□□□ 1.45
PDX1P52945 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PDX1P52945 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDX1P52945 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDX1P52945 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.1■■□□□ 1.45
PDX1P52945 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDX1P52945 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDX1P52945 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDX1P52945 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.09■■□□□ 1.45
PDX1P52945 AL592293.1-201ENST00000502889 1188 ntBASIC24.09■■□□□ 1.45
PDX1P52945 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.09■■□□□ 1.45
PDX1P52945 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.09■■□□□ 1.45
PDX1P52945 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.09■■□□□ 1.45
PDX1P52945 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms