Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDR1P51861 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDR1P51861 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDR1P51861 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.97■■□□□ 1.91
CDR1P51861 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CDR1P51861 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CDR1P51861 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.97■■□□□ 1.91
CDR1P51861 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDR1P51861 AC135731.1-201ENST00000569415 2548 ntBASIC26.96■■□□□ 1.91
CDR1P51861 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
CDR1P51861 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDR1P51861 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.96■■□□□ 1.91
CDR1P51861 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.96■■□□□ 1.91
CDR1P51861 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CDR1P51861 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CDR1P51861 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
CDR1P51861 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDR1P51861 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.95■■□□□ 1.9
CDR1P51861 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.95■■□□□ 1.9
CDR1P51861 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDR1P51861 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDR1P51861 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDR1P51861 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
CDR1P51861 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
CDR1P51861 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDR1P51861 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
CDR1P51861 GPX1-201ENST00000419349 1106 ntBASIC26.94■■□□□ 1.9
CDR1P51861 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDR1P51861 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CDR1P51861 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.93■■□□□ 1.9
CDR1P51861 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CDR1P51861 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
CDR1P51861 AP004833.2-201ENST00000532228 1454 ntBASIC26.93■■□□□ 1.9
CDR1P51861 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDR1P51861 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDR1P51861 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.92■■□□□ 1.9
CDR1P51861 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDR1P51861 AC008813.1-201ENST00000536597 885 ntBASIC26.91■■□□□ 1.9
CDR1P51861 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CDR1P51861 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDR1P51861 MIR219A2-201ENST00000608502 1504 ntBASIC26.9■■□□□ 1.9
CDR1P51861 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDR1P51861 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDR1P51861 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
CDR1P51861 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.9■■□□□ 1.9
CDR1P51861 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.9■■□□□ 1.9
CDR1P51861 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDR1P51861 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
CDR1P51861 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.89
CDR1P51861 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.89■■□□□ 1.89
CDR1P51861 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.89■■□□□ 1.89
CDR1P51861 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.89■■□□□ 1.89
CDR1P51861 AC022413.1-201ENST00000624602 984 ntBASIC26.88■■□□□ 1.89
CDR1P51861 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDR1P51861 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDR1P51861 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDR1P51861 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.87■■□□□ 1.89
CDR1P51861 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
CDR1P51861 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDR1P51861 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.86■■□□□ 1.89
CDR1P51861 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDR1P51861 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDR1P51861 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDR1P51861 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDR1P51861 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.86■■□□□ 1.89
CDR1P51861 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.86■■□□□ 1.89
CDR1P51861 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDR1P51861 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.85■■□□□ 1.89
CDR1P51861 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDR1P51861 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDR1P51861 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CDR1P51861 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CDR1P51861 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.85■■□□□ 1.89
CDR1P51861 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.85■■□□□ 1.89
CDR1P51861 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDR1P51861 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CDR1P51861 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDR1P51861 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDR1P51861 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDR1P51861 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDR1P51861 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDR1P51861 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDR1P51861 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.82■■□□□ 1.88
CDR1P51861 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDR1P51861 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDR1P51861 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDR1P51861 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.81■■□□□ 1.88
CDR1P51861 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
CDR1P51861 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDR1P51861 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.8■■□□□ 1.88
CDR1P51861 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CDR1P51861 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.79■■□□□ 1.88
CDR1P51861 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
CDR1P51861 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CDR1P51861 AC148477.6-201ENST00000623746 465 ntBASIC26.78■■□□□ 1.88
CDR1P51861 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.77■■□□□ 1.88
CDR1P51861 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.77■■□□□ 1.88
CDR1P51861 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CDR1P51861 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CDR1P51861 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms