Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF144AP50876 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF144AP50876 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
RNF144AP50876 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF144AP50876 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF144AP50876 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
RNF144AP50876 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
RNF144AP50876 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.07■■□□□ 1.28
RNF144AP50876 MIR7108-201ENST00000614319 87 ntBASIC23.07■■□□□ 1.28
RNF144AP50876 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF144AP50876 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF144AP50876 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
RNF144AP50876 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.06■■□□□ 1.28
RNF144AP50876 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF144AP50876 CR559946.2-201ENST00000623684 991 ntBASIC23.06■■□□□ 1.28
RNF144AP50876 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
RNF144AP50876 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.06■■□□□ 1.28
RNF144AP50876 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF144AP50876 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF144AP50876 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.05■■□□□ 1.28
RNF144AP50876 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF144AP50876 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RNF144AP50876 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF144AP50876 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RNF144AP50876 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF144AP50876 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
RNF144AP50876 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.04■■□□□ 1.28
RNF144AP50876 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.04■■□□□ 1.28
RNF144AP50876 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF144AP50876 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF144AP50876 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF144AP50876 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF144AP50876 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF144AP50876 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF144AP50876 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF144AP50876 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF144AP50876 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF144AP50876 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF144AP50876 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RNF144AP50876 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF144AP50876 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF144AP50876 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF144AP50876 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF144AP50876 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF144AP50876 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF144AP50876 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF144AP50876 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
RNF144AP50876 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.01■■□□□ 1.27
RNF144AP50876 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RNF144AP50876 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF144AP50876 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RNF144AP50876 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF144AP50876 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RNF144AP50876 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF144AP50876 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF144AP50876 HLA-V-202ENST00000446817 847 ntBASIC22.99■■□□□ 1.27
RNF144AP50876 AC016575.1-201ENST00000607026 382 ntBASIC22.99■■□□□ 1.27
RNF144AP50876 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.99■■□□□ 1.27
RNF144AP50876 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
RNF144AP50876 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF144AP50876 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.98■■□□□ 1.27
RNF144AP50876 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF144AP50876 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
RNF144AP50876 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF144AP50876 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
RNF144AP50876 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.97■■□□□ 1.27
RNF144AP50876 MIR3648-2-201ENST00000581792 180 ntBASIC22.97■■□□□ 1.27
RNF144AP50876 MIR3648-1-201ENST00000615959 180 ntBASIC22.97■■□□□ 1.27
RNF144AP50876 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RNF144AP50876 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF144AP50876 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
RNF144AP50876 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.96■■□□□ 1.27
RNF144AP50876 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF144AP50876 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.96■■□□□ 1.27
RNF144AP50876 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RNF144AP50876 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
RNF144AP50876 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RNF144AP50876 AL449106.1-201ENST00000608517 1980 ntBASIC22.94■■□□□ 1.26
RNF144AP50876 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF144AP50876 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF144AP50876 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.93■■□□□ 1.26
RNF144AP50876 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RNF144AP50876 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.93■■□□□ 1.26
RNF144AP50876 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
RNF144AP50876 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
RNF144AP50876 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RNF144AP50876 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.92■■□□□ 1.26
RNF144AP50876 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RNF144AP50876 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF144AP50876 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.92■■□□□ 1.26
RNF144AP50876 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
RNF144AP50876 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
RNF144AP50876 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF144AP50876 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.91■■□□□ 1.26
RNF144AP50876 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RNF144AP50876 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF144AP50876 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF144AP50876 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
RNF144AP50876 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF144AP50876 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms