Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
COL15A1P39059 AC100797.4-201ENST00000631653 1827 ntBASIC32.11■■■□□ 2.73
COL15A1P39059 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
COL15A1P39059 ABCB10P1-201ENST00000614297 2181 ntBASIC32.11■■■□□ 2.73
COL15A1P39059 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.1■■■□□ 2.73
COL15A1P39059 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC32.1■■■□□ 2.73
COL15A1P39059 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
COL15A1P39059 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
COL15A1P39059 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
COL15A1P39059 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.09■■■□□ 2.73
COL15A1P39059 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC32.09■■■□□ 2.73
COL15A1P39059 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
COL15A1P39059 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC32.09■■■□□ 2.73
COL15A1P39059 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
COL15A1P39059 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
COL15A1P39059 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
COL15A1P39059 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
COL15A1P39059 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
COL15A1P39059 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
COL15A1P39059 AC133552.2-201ENST00000619106 1032 ntBASIC32.08■■■□□ 2.73
COL15A1P39059 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.07■■■□□ 2.73
COL15A1P39059 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
COL15A1P39059 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
COL15A1P39059 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC32.07■■■□□ 2.72
COL15A1P39059 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC32.07■■■□□ 2.72
COL15A1P39059 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC32.07■■■□□ 2.72
COL15A1P39059 AL139393.2-201ENST00000608721 2025 ntBASIC32.06■■■□□ 2.72
COL15A1P39059 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.05■■■□□ 2.72
COL15A1P39059 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
COL15A1P39059 DUX4L18-201ENST00000553347 1267 ntBASIC32.05■■■□□ 2.72
COL15A1P39059 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
COL15A1P39059 AL359258.2-201ENST00000564063 1566 ntBASIC32.05■■■□□ 2.72
COL15A1P39059 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC32.04■■■□□ 2.72
COL15A1P39059 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.04■■■□□ 2.72
COL15A1P39059 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
COL15A1P39059 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC32.04■■■□□ 2.72
COL15A1P39059 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC32.03■■■□□ 2.72
COL15A1P39059 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
COL15A1P39059 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC32.03■■■□□ 2.72
COL15A1P39059 SMPD5-203ENST00000639008 1464 ntBASIC32.03■■■□□ 2.72
COL15A1P39059 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
COL15A1P39059 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
COL15A1P39059 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.03■■■□□ 2.72
COL15A1P39059 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
COL15A1P39059 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
COL15A1P39059 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC32.02■■■□□ 2.72
COL15A1P39059 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC32.01■■■□□ 2.71
COL15A1P39059 AC025884.2-201ENST00000553429 711 ntBASIC32.01■■■□□ 2.71
COL15A1P39059 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
COL15A1P39059 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.01■■■□□ 2.71
COL15A1P39059 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
COL15A1P39059 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.01■■■□□ 2.71
COL15A1P39059 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
COL15A1P39059 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
COL15A1P39059 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC32■■■□□ 2.71
COL15A1P39059 HES4-204ENST00000484667 667 ntTSL 3 BASIC32■■■□□ 2.71
COL15A1P39059 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC32■■■□□ 2.71
COL15A1P39059 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
COL15A1P39059 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
COL15A1P39059 AC026202.3-201ENST00000600805 1127 ntBASIC31.99■■■□□ 2.71
COL15A1P39059 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.99■■■□□ 2.71
COL15A1P39059 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
COL15A1P39059 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
COL15A1P39059 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
COL15A1P39059 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
COL15A1P39059 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
COL15A1P39059 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
COL15A1P39059 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.97■■■□□ 2.71
COL15A1P39059 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.96■■■□□ 2.71
COL15A1P39059 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
COL15A1P39059 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.96■■■□□ 2.71
COL15A1P39059 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
COL15A1P39059 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.95■■■□□ 2.7
COL15A1P39059 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
COL15A1P39059 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
COL15A1P39059 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.92■■■□□ 2.7
COL15A1P39059 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.92■■■□□ 2.7
COL15A1P39059 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
COL15A1P39059 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
COL15A1P39059 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
COL15A1P39059 DUX4L9-201ENST00000449051 1259 ntBASIC31.92■■■□□ 2.7
COL15A1P39059 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.91■■■□□ 2.7
COL15A1P39059 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
COL15A1P39059 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.91■■■□□ 2.7
COL15A1P39059 AL451085.2-201ENST00000605085 799 ntBASIC31.91■■■□□ 2.7
COL15A1P39059 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
COL15A1P39059 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
COL15A1P39059 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
COL15A1P39059 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.89■■■□□ 2.7
COL15A1P39059 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
COL15A1P39059 RP9P-202ENST00000450133 1212 ntBASIC31.89■■■□□ 2.7
COL15A1P39059 AC093536.1-201ENST00000569153 554 ntBASIC31.89■■■□□ 2.7
COL15A1P39059 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.89■■■□□ 2.7
COL15A1P39059 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
COL15A1P39059 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.88■■■□□ 2.69
COL15A1P39059 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.88■■■□□ 2.69
COL15A1P39059 AL035685.1-201ENST00000636663 812 ntBASIC31.88■■■□□ 2.69
COL15A1P39059 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
COL15A1P39059 RAP2CP1-202ENST00000605179 643 ntBASIC31.87■■■□□ 2.69
COL15A1P39059 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms