Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SAA4P35542 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SAA4P35542 AC018358.1-201ENST00000631079 1402 ntBASIC20.3■□□□□ 0.84
SAA4P35542 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SAA4P35542 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SAA4P35542 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SAA4P35542 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SAA4P35542 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SAA4P35542 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.29■□□□□ 0.84
SAA4P35542 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SAA4P35542 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.29■□□□□ 0.84
SAA4P35542 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SAA4P35542 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SAA4P35542 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SAA4P35542 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.28■□□□□ 0.84
SAA4P35542 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.28■□□□□ 0.84
SAA4P35542 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SAA4P35542 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SAA4P35542 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.27■□□□□ 0.84
SAA4P35542 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SAA4P35542 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SAA4P35542 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SAA4P35542 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.26■□□□□ 0.83
SAA4P35542 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.26■□□□□ 0.83
SAA4P35542 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SAA4P35542 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SAA4P35542 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SAA4P35542 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SAA4P35542 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.25■□□□□ 0.83
SAA4P35542 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SAA4P35542 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SAA4P35542 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SAA4P35542 AC092296.2-201ENST00000589470 999 ntBASIC20.24■□□□□ 0.83
SAA4P35542 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
SAA4P35542 AL359258.2-201ENST00000564063 1566 ntBASIC20.24■□□□□ 0.83
SAA4P35542 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SAA4P35542 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SAA4P35542 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SAA4P35542 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SAA4P35542 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SAA4P35542 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SAA4P35542 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SAA4P35542 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SAA4P35542 ABHD17AP5-201ENST00000580133 923 ntBASIC20.2■□□□□ 0.82
SAA4P35542 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SAA4P35542 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.2■□□□□ 0.82
SAA4P35542 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SAA4P35542 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SAA4P35542 AL157400.5-201ENST00000507624 621 ntBASIC20.19■□□□□ 0.82
SAA4P35542 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SAA4P35542 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SAA4P35542 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.19■□□□□ 0.82
SAA4P35542 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SAA4P35542 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.18■□□□□ 0.82
SAA4P35542 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SAA4P35542 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAA4P35542 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAA4P35542 ECEL1P2-201ENST00000461596 1295 ntBASIC20.17■□□□□ 0.82
SAA4P35542 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.17■□□□□ 0.82
SAA4P35542 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.17■□□□□ 0.82
SAA4P35542 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
SAA4P35542 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAA4P35542 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.16■□□□□ 0.82
SAA4P35542 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.16■□□□□ 0.82
SAA4P35542 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAA4P35542 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SAA4P35542 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SAA4P35542 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.16■□□□□ 0.82
SAA4P35542 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.15■□□□□ 0.82
SAA4P35542 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.15■□□□□ 0.82
SAA4P35542 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.15■□□□□ 0.82
SAA4P35542 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SAA4P35542 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SAA4P35542 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SAA4P35542 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
SAA4P35542 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SAA4P35542 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SAA4P35542 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SAA4P35542 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.14■□□□□ 0.81
SAA4P35542 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SAA4P35542 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SAA4P35542 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.13■□□□□ 0.81
SAA4P35542 LINC01003-201ENST00000564834 1764 ntBASIC20.13■□□□□ 0.81
SAA4P35542 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SAA4P35542 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SAA4P35542 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SAA4P35542 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SAA4P35542 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SAA4P35542 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.11■□□□□ 0.81
SAA4P35542 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SAA4P35542 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.11■□□□□ 0.81
SAA4P35542 WHAMMP3-201ENST00000611636 1609 ntBASIC20.11■□□□□ 0.81
SAA4P35542 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SAA4P35542 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SAA4P35542 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SAA4P35542 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SAA4P35542 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SAA4P35542 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.1■□□□□ 0.81
SAA4P35542 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SAA4P35542 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms