Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL8A2P25067 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL8A2P25067 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL8A2P25067 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COL8A2P25067 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL8A2P25067 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL8A2P25067 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.13■□□□□ 0.97
COL8A2P25067 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
COL8A2P25067 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
COL8A2P25067 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL8A2P25067 AC126177.7-201ENST00000547904 679 ntBASIC21.13■□□□□ 0.97
COL8A2P25067 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
COL8A2P25067 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL8A2P25067 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
COL8A2P25067 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL8A2P25067 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL8A2P25067 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL8A2P25067 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL8A2P25067 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL8A2P25067 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL8A2P25067 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.1■□□□□ 0.97
COL8A2P25067 AC092296.2-201ENST00000589470 999 ntBASIC21.1■□□□□ 0.97
COL8A2P25067 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
COL8A2P25067 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL8A2P25067 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL8A2P25067 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL8A2P25067 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.08■□□□□ 0.97
COL8A2P25067 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
COL8A2P25067 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL8A2P25067 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL8A2P25067 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL8A2P25067 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL8A2P25067 AL359258.2-201ENST00000564063 1566 ntBASIC21.07■□□□□ 0.96
COL8A2P25067 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL8A2P25067 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COL8A2P25067 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL8A2P25067 ECEL1P2-201ENST00000461596 1295 ntBASIC21.07■□□□□ 0.96
COL8A2P25067 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.07■□□□□ 0.96
COL8A2P25067 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL8A2P25067 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.07■□□□□ 0.96
COL8A2P25067 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.06■□□□□ 0.96
COL8A2P25067 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL8A2P25067 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.05■□□□□ 0.96
COL8A2P25067 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL8A2P25067 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.05■□□□□ 0.96
COL8A2P25067 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.05■□□□□ 0.96
COL8A2P25067 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL8A2P25067 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL8A2P25067 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL8A2P25067 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
COL8A2P25067 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
COL8A2P25067 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL8A2P25067 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL8A2P25067 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL8A2P25067 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL8A2P25067 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL8A2P25067 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL8A2P25067 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL8A2P25067 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.02■□□□□ 0.96
COL8A2P25067 AL157400.5-201ENST00000507624 621 ntBASIC21.02■□□□□ 0.96
COL8A2P25067 NTF6A-201ENST00000591175 560 ntBASIC21.02■□□□□ 0.96
COL8A2P25067 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL8A2P25067 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
COL8A2P25067 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL8A2P25067 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
COL8A2P25067 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL8A2P25067 AC018358.1-201ENST00000631079 1402 ntBASIC21.01■□□□□ 0.95
COL8A2P25067 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.01■□□□□ 0.95
COL8A2P25067 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.01■□□□□ 0.95
COL8A2P25067 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.01■□□□□ 0.95
COL8A2P25067 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.01■□□□□ 0.95
COL8A2P25067 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL8A2P25067 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL8A2P25067 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
COL8A2P25067 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL8A2P25067 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21■□□□□ 0.95
COL8A2P25067 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COL8A2P25067 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL8A2P25067 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.99■□□□□ 0.95
COL8A2P25067 U85056.1-201ENST00000616429 682 ntBASIC20.99■□□□□ 0.95
COL8A2P25067 DRD5P2-201ENST00000421395 2012 ntBASIC20.99■□□□□ 0.95
COL8A2P25067 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL8A2P25067 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
COL8A2P25067 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
COL8A2P25067 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.97■□□□□ 0.95
COL8A2P25067 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.97■□□□□ 0.95
COL8A2P25067 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.97■□□□□ 0.95
COL8A2P25067 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL8A2P25067 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL8A2P25067 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL8A2P25067 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL8A2P25067 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.96■□□□□ 0.95
COL8A2P25067 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.96■□□□□ 0.95
COL8A2P25067 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
COL8A2P25067 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL8A2P25067 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
COL8A2P25067 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL8A2P25067 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL8A2P25067 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL8A2P25067 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms