Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.52■□□□□ 0.72
CD28P10747 AL359258.2-201ENST00000564063 1566 ntBASIC19.52■□□□□ 0.71
CD28P10747 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.51■□□□□ 0.71
CD28P10747 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.51■□□□□ 0.71
CD28P10747 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD28P10747 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.5■□□□□ 0.71
CD28P10747 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD28P10747 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD28P10747 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CD28P10747 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD28P10747 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD28P10747 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD28P10747 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD28P10747 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CD28P10747 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD28P10747 AC004987.1-201ENST00000428627 508 ntBASIC19.48■□□□□ 0.71
CD28P10747 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.48■□□□□ 0.71
CD28P10747 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.48■□□□□ 0.71
CD28P10747 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD28P10747 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD28P10747 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.48■□□□□ 0.71
CD28P10747 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD28P10747 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD28P10747 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD28P10747 TSPY13P-201ENST00000338964 914 ntBASIC19.47■□□□□ 0.71
CD28P10747 AC007029.1-201ENST00000604183 313 ntBASIC19.47■□□□□ 0.71
CD28P10747 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.47■□□□□ 0.71
CD28P10747 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.47■□□□□ 0.71
CD28P10747 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD28P10747 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD28P10747 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD28P10747 ABCB10P1-201ENST00000614297 2181 ntBASIC19.46■□□□□ 0.71
CD28P10747 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD28P10747 ATP5G2P3-201ENST00000429083 425 ntBASIC19.46■□□□□ 0.71
CD28P10747 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD28P10747 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.46■□□□□ 0.71
CD28P10747 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CD28P10747 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CD28P10747 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD28P10747 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD28P10747 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.45■□□□□ 0.7
CD28P10747 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.45■□□□□ 0.7
CD28P10747 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.45■□□□□ 0.7
CD28P10747 SMPD5-203ENST00000639008 1464 ntBASIC19.45■□□□□ 0.7
CD28P10747 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.45■□□□□ 0.7
CD28P10747 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD28P10747 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.44■□□□□ 0.7
CD28P10747 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD28P10747 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.44■□□□□ 0.7
CD28P10747 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD28P10747 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD28P10747 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD28P10747 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD28P10747 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.44■□□□□ 0.7
CD28P10747 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.44■□□□□ 0.7
CD28P10747 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD28P10747 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD28P10747 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.44■□□□□ 0.7
CD28P10747 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.44■□□□□ 0.7
CD28P10747 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD28P10747 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD28P10747 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD28P10747 AP002414.2-202ENST00000590929 1450 ntBASIC19.43■□□□□ 0.7
CD28P10747 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CD28P10747 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD28P10747 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.42■□□□□ 0.7
CD28P10747 AC133552.2-201ENST00000619106 1032 ntBASIC19.42■□□□□ 0.7
CD28P10747 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CD28P10747 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CD28P10747 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CD28P10747 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.41■□□□□ 0.7
CD28P10747 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD28P10747 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD28P10747 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD28P10747 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD28P10747 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD28P10747 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD28P10747 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD28P10747 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD28P10747 AC009831.1-201ENST00000580420 1582 ntBASIC19.4■□□□□ 0.7
CD28P10747 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD28P10747 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.4■□□□□ 0.7
CD28P10747 AL592293.1-201ENST00000502889 1188 ntBASIC19.4■□□□□ 0.7
CD28P10747 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD28P10747 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CD28P10747 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.39■□□□□ 0.7
CD28P10747 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD28P10747 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD28P10747 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.39■□□□□ 0.69
CD28P10747 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.39■□□□□ 0.69
CD28P10747 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD28P10747 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.39■□□□□ 0.69
CD28P10747 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD28P10747 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD28P10747 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD28P10747 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD28P10747 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD28P10747 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.38■□□□□ 0.69
CD28P10747 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD28P10747 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms