Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.19■■■□□ 2.58
CSF1RP07333 U85056.1-201ENST00000616429 682 ntBASIC31.18■■■□□ 2.58
CSF1RP07333 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.18■■■□□ 2.58
CSF1RP07333 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
CSF1RP07333 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CSF1RP07333 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.17■■■□□ 2.58
CSF1RP07333 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.17■■■□□ 2.58
CSF1RP07333 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.17■■■□□ 2.58
CSF1RP07333 AC018358.1-201ENST00000631079 1402 ntBASIC31.16■■■□□ 2.58
CSF1RP07333 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CSF1RP07333 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
CSF1RP07333 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
CSF1RP07333 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
CSF1RP07333 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CSF1RP07333 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CSF1RP07333 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CSF1RP07333 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CSF1RP07333 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.13■■■□□ 2.57
CSF1RP07333 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.12■■■□□ 2.57
CSF1RP07333 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CSF1RP07333 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CSF1RP07333 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CSF1RP07333 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CSF1RP07333 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CSF1RP07333 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.11■■■□□ 2.57
CSF1RP07333 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CSF1RP07333 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CSF1RP07333 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
CSF1RP07333 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
CSF1RP07333 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CSF1RP07333 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CSF1RP07333 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
CSF1RP07333 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
CSF1RP07333 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CSF1RP07333 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CSF1RP07333 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CSF1RP07333 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.08■■■□□ 2.57
CSF1RP07333 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CSF1RP07333 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.07■■■□□ 2.56
CSF1RP07333 AC139426.1-201ENST00000568218 2529 ntBASIC31.07■■■□□ 2.56
CSF1RP07333 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.07■■■□□ 2.56
CSF1RP07333 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CSF1RP07333 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CSF1RP07333 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CSF1RP07333 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CSF1RP07333 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CSF1RP07333 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
CSF1RP07333 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CSF1RP07333 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CSF1RP07333 AC025884.2-201ENST00000553429 711 ntBASIC31.05■■■□□ 2.56
CSF1RP07333 AC007029.1-201ENST00000604183 313 ntBASIC31.05■■■□□ 2.56
CSF1RP07333 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.05■■■□□ 2.56
CSF1RP07333 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.05■■■□□ 2.56
CSF1RP07333 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.05■■■□□ 2.56
CSF1RP07333 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CSF1RP07333 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.05■■■□□ 2.56
CSF1RP07333 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CSF1RP07333 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.04■■■□□ 2.56
CSF1RP07333 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
CSF1RP07333 SMPD5-203ENST00000639008 1464 ntBASIC31.03■■■□□ 2.56
CSF1RP07333 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.03■■■□□ 2.56
CSF1RP07333 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.03■■■□□ 2.56
CSF1RP07333 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CSF1RP07333 AC012354.3-201ENST00000623734 483 ntBASIC31.03■■■□□ 2.56
CSF1RP07333 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CSF1RP07333 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CSF1RP07333 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.02■■■□□ 2.56
CSF1RP07333 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CSF1RP07333 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.02■■■□□ 2.56
CSF1RP07333 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CSF1RP07333 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CSF1RP07333 KRT18P60-201ENST00000312876 1297 ntBASIC31.01■■■□□ 2.55
CSF1RP07333 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.01■■■□□ 2.55
CSF1RP07333 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
CSF1RP07333 REST-210ENST00000638187 1334 ntTSL 5 BASIC31■■■□□ 2.55
CSF1RP07333 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
CSF1RP07333 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CSF1RP07333 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31■■■□□ 2.55
CSF1RP07333 DRD5P2-201ENST00000421395 2012 ntBASIC31■■■□□ 2.55
CSF1RP07333 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.99■■■□□ 2.55
CSF1RP07333 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
CSF1RP07333 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.98■■■□□ 2.55
CSF1RP07333 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
CSF1RP07333 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CSF1RP07333 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
CSF1RP07333 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
CSF1RP07333 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CSF1RP07333 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CSF1RP07333 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.96■■■□□ 2.55
CSF1RP07333 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CSF1RP07333 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC30.95■■■□□ 2.55
CSF1RP07333 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CSF1RP07333 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CSF1RP07333 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC30.94■■■□□ 2.54
CSF1RP07333 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CSF1RP07333 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CSF1RP07333 AC009831.1-201ENST00000580420 1582 ntBASIC30.92■■■□□ 2.54
CSF1RP07333 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CSF1RP07333 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
CSF1RP07333 GFER-205ENST00000569451 517 ntTSL 5 BASIC30.91■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms