Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 ZNF780B-203ENST00000593605 509 ntTSL 416.29■□□□□ 0.21e-10■■■■■ 241.2
SF3B1O75533 DLG4-204ENST00000447163 763 ntTSL 516.29■□□□□ 0.21e-10■■■■■ 241.2
SF3B1O75533 CLN8-209ENST00000635970 1958 ntTSL 516.21■□□□□ 0.191e-10■■■■■ 241.2
SF3B1O75533 PARD6G-AS1-203ENST00000587254 584 ntTSL 416.15■□□□□ 0.181e-10■■■■■ 241.2
SF3B1O75533 PARD6G-AS1-201ENST00000585422 525 ntTSL 416.15■□□□□ 0.181e-10■■■■■ 241.2
SF3B1O75533 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.13■□□□□ 0.171e-10■■■■■ 241.2
SF3B1O75533 PACRGL-210ENST00000504630 620 ntTSL 316.11■□□□□ 0.171e-10■■■■■ 241.2
SF3B1O75533 EEF1G-203ENST00000525340 2496 ntTSL 1 (best)16.06■□□□□ 0.161e-10■■■■■ 241.2
SF3B1O75533 TMEM175-202ENST00000438836 2236 ntTSL 215.97■□□□□ 0.151e-10■■■■■ 241.2
SF3B1O75533 WSB2-208ENST00000542726 587 ntTSL 215.91■□□□□ 0.141e-10■■■■■ 241.2
SF3B1O75533 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.121e-10■■■■■ 241.2
SF3B1O75533 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.111e-10■■■■■ 241.2
SF3B1O75533 SLC39A4-205ENST00000529462 2778 ntTSL 215.65■□□□□ 0.12e-6■■■■■ 241.2
SF3B1O75533 TMEM175-215ENST00000513682 581 ntTSL 515.64■□□□□ 0.091e-10■■■■■ 241.2
SF3B1O75533 MIER2-202ENST00000586994 1002 ntTSL 215.58■□□□□ 0.081e-10■■■■■ 241.2
SF3B1O75533 PLA2G15-208ENST00000565744 577 ntTSL 415.54■□□□□ 0.081e-10■■■■■ 241.2
SF3B1O75533 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.49■□□□□ 0.071e-10■■■■■ 241.2
SF3B1O75533 LZTS2-206ENST00000481129 745 ntTSL 315.45■□□□□ 0.068e-7■■■■■ 241.2
SF3B1O75533 TMEM175-203ENST00000452360 2011 ntTSL 215.44■□□□□ 0.061e-10■■■■■ 241.2
SF3B1O75533 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.4■□□□□ 0.061e-10■■■■■ 241.2
SF3B1O75533 MIER2-204ENST00000592722 563 ntTSL 315.39■□□□□ 0.051e-10■■■■■ 241.2
SF3B1O75533 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.34■□□□□ 0.051e-10■■■■■ 241.2
SF3B1O75533 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.031e-10■■■■■ 241.2
SF3B1O75533 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.031e-10■■■■■ 241.2
SF3B1O75533 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.21■□□□□ 0.031e-10■■■■■ 241.2
SF3B1O75533 GPAA1-208ENST00000527144 767 ntTSL 315.18■□□□□ 0.021e-10■■■■■ 241.2
SF3B1O75533 DHRS2-207ENST00000556701 3157 ntTSL 1 (best)15.13■□□□□ 0.011e-10■■■■■ 241.2
SF3B1O75533 TMEM175-218ENST00000514546 619 ntTSL 514.85□□□□□ -0.031e-10■■■■■ 241.2
SF3B1O75533 PTPN2-207ENST00000589086 549 ntTSL 414.8□□□□□ -0.041e-10■■■■■ 241.2
SF3B1O75533 MIER2-207ENST00000635755 440 ntTSL 514.74□□□□□ -0.051e-10■■■■■ 241.2
SF3B1O75533 TMEM175-207ENST00000504744 776 ntTSL 514.74□□□□□ -0.051e-10■■■■■ 241.2
SF3B1O75533 AL928654.5-201ENST00000624831 2501 ntBASIC14.69□□□□□ -0.061e-10■■■■■ 241.2
SF3B1O75533 NOP53-203ENST00000594525 876 ntTSL 1 (best)14.61□□□□□ -0.071e-10■■■■■ 241.2
SF3B1O75533 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.081e-10■■■■■ 241.2
SF3B1O75533 SH3BP5L-202ENST00000475978 4122 ntTSL 214.57□□□□□ -0.081e-10■■■■■ 241.2
SF3B1O75533 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.56□□□□□ -0.081e-10■■■■■ 241.2
SF3B1O75533 NOP53-210ENST00000599582 626 ntTSL 314.48□□□□□ -0.091e-10■■■■■ 241.2
SF3B1O75533 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC14.47□□□□□ -0.091e-10■■■■■ 241.2
SF3B1O75533 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.11e-10■■■■■ 241.2
SF3B1O75533 AP000437.1-201ENST00000624057 2085 ntBASIC14.39□□□□□ -0.111e-10■■■■■ 241.2
SF3B1O75533 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.28□□□□□ -0.121e-10■■■■■ 241.2
SF3B1O75533 GRID1-202ENST00000464741 3243 ntTSL 1 (best)14.27□□□□□ -0.131e-10■■■■■ 241.2
SF3B1O75533 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.26□□□□□ -0.131e-10■■■■■ 241.2
SF3B1O75533 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.131e-10■■■■■ 241.2
SF3B1O75533 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.19□□□□□ -0.141e-10■■■■■ 241.2
SF3B1O75533 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC14.11□□□□□ -0.151e-10■■■■■ 241.2
SF3B1O75533 INTS6-216ENST00000491189 496 ntTSL 414.07□□□□□ -0.161e-10■■■■■ 241.2
SF3B1O75533 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.161e-10■■■■■ 241.2
SF3B1O75533 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.171e-10■■■■■ 241.2
SF3B1O75533 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC14.01□□□□□ -0.171e-10■■■■■ 241.2
SF3B1O75533 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.181e-10■■■■■ 241.2
SF3B1O75533 PHC1-211ENST00000542346 483 ntTSL 513.94□□□□□ -0.181e-10■■■■■ 241.2
SF3B1O75533 PLA2G15-205ENST00000562966 572 ntTSL 213.93□□□□□ -0.181e-10■■■■■ 241.2
SF3B1O75533 PSMD8-205ENST00000591250 578 ntTSL 313.92□□□□□ -0.181e-10■■■■■ 241.2
SF3B1O75533 LINC00969-285ENST00000627152 846 ntTSL 513.91□□□□□ -0.181e-10■■■■■ 241.2
SF3B1O75533 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.197e-8■■■■■ 241.2
SF3B1O75533 CCDC88A-211ENST00000471947 3713 ntTSL 1 (best)13.88□□□□□ -0.191e-10■■■■■ 241.2
SF3B1O75533 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC13.88□□□□□ -0.191e-10■■■■■ 241.2
SF3B1O75533 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.21e-10■■■■■ 241.2
SF3B1O75533 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC13.75□□□□□ -0.211e-10■■■■■ 241.2
SF3B1O75533 PASK-214ENST00000493544 5174 ntTSL 1 (best)13.71□□□□□ -0.221e-10■■■■■ 241.2
SF3B1O75533 WDR41-210ENST00000507452 680 ntTSL 313.64□□□□□ -0.232e-20■■■■■ 241.2
SF3B1O75533 WDR41-207ENST00000506474 560 ntTSL 413.64□□□□□ -0.232e-20■■■■■ 241.2
SF3B1O75533 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC13.62□□□□□ -0.231e-10■■■■■ 241.2
SF3B1O75533 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.231e-10■■■■■ 241.2
SF3B1O75533 TMEM101-207ENST00000591162 478 ntTSL 313.56□□□□□ -0.241e-10■■■■■ 241.2
SF3B1O75533 KCTD15-210ENST00000590906 534 ntTSL 413.48□□□□□ -0.251e-10■■■■■ 241.2
SF3B1O75533 TRIM52-203ENST00000513146 763 ntTSL 313.4□□□□□ -0.261e-10■■■■■ 241.2
SF3B1O75533 ACTR1A-207ENST00000636707 1046 ntTSL 513.34□□□□□ -0.271e-10■■■■■ 241.2
SF3B1O75533 KCTD15-211ENST00000592210 743 ntTSL 213.32□□□□□ -0.281e-10■■■■■ 241.2
SF3B1O75533 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC13.31□□□□□ -0.281e-10■■■■■ 241.2
SF3B1O75533 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC13.31□□□□□ -0.281e-10■■■■■ 241.2
SF3B1O75533 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC13.27□□□□□ -0.291e-10■■■■■ 241.2
SF3B1O75533 MYO18A-205ENST00000529578 2667 ntTSL 213.26□□□□□ -0.291e-10■■■■■ 241.2
SF3B1O75533 NSA2-201ENST00000296802 1199 ntTSL 5 BASIC13.17□□□□□ -0.31e-10■■■■■ 241.2
SF3B1O75533 LINC00969-342ENST00000631366 751 ntTSL 513.14□□□□□ -0.311e-10■■■■■ 241.2
SF3B1O75533 LINC00969-236ENST00000599448 780 ntTSL 513.14□□□□□ -0.311e-10■■■■■ 241.2
SF3B1O75533 TRIM52-206ENST00000612671 4753 nt13.13□□□□□ -0.311e-10■■■■■ 241.2
SF3B1O75533 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC13.06□□□□□ -0.321e-10■■■■■ 241.2
SF3B1O75533 ZNF766-202ENST00000593612 2331 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.331e-10■■■■■ 241.2
SF3B1O75533 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.331e-10■■■■■ 241.2
SF3B1O75533 PFAS-205ENST00000580356 4242 ntTSL 212.99□□□□□ -0.337e-8■■■■■ 241.2
SF3B1O75533 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.331e-10■■■■■ 241.2
SF3B1O75533 CLN8-207ENST00000524258 835 ntTSL 212.97□□□□□ -0.331e-10■■■■■ 241.2
SF3B1O75533 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC12.94□□□□□ -0.341e-10■■■■■ 241.2
SF3B1O75533 LINC00969-336ENST00000631189 1156 ntTSL 512.83□□□□□ -0.361e-10■■■■■ 241.2
SF3B1O75533 MESD-206ENST00000561312 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.361e-10■■■■■ 241.2
SF3B1O75533 SGO1-AS1-204ENST00000634618 2371 ntTSL 5 BASIC12.77□□□□□ -0.371e-10■■■■■ 241.2
SF3B1O75533 ZNF766-208ENST00000600821 568 ntTSL 4 BASIC12.71□□□□□ -0.371e-10■■■■■ 241.2
SF3B1O75533 AL133467.2-201ENST00000555032 1714 ntTSL 4 BASIC12.7□□□□□ -0.381e-10■■■■■ 241.2
SF3B1O75533 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.381e-10■■■■■ 241.2
SF3B1O75533 WSB2-206ENST00000537945 795 ntTSL 312.61□□□□□ -0.391e-10■■■■■ 241.2
SF3B1O75533 LINC00969-312ENST00000628823 616 ntTSL 512.6□□□□□ -0.391e-10■■■■■ 241.2
SF3B1O75533 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.41e-10■■■■■ 241.2
SF3B1O75533 CLN8-212ENST00000637083 2001 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.41e-10■■■■■ 241.2
SF3B1O75533 TSHZ1-202ENST00000560661 551 ntTSL 412.49□□□□□ -0.411e-10■■■■■ 241.2
SF3B1O75533 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.411e-10■■■■■ 241.2
SF3B1O75533 LINC00969-204ENST00000420851 868 ntTSL 5 BASIC12.42□□□□□ -0.421e-10■■■■■ 241.2
SF3B1O75533 LINC00969-235ENST00000598992 1005 ntTSL 512.42□□□□□ -0.421e-10■■■■■ 241.2
SF3B1O75533 LRRC8A-202ENST00000372599 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.431e-10■■■■■ 241.2
Retrieved 100 of 46,956 protein–RNA pairs in 3315.3 ms