Protein–RNA interactions for Protein: O75525

KHDRBS3, KH domain-containing, RNA-binding, signal transduction-associated protein 3, humanhuman

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3O75525 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KHDRBS3O75525 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KHDRBS3O75525 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KHDRBS3O75525 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
KHDRBS3O75525 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KHDRBS3O75525 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KHDRBS3O75525 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
KHDRBS3O75525 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KHDRBS3O75525 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KHDRBS3O75525 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KHDRBS3O75525 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
KHDRBS3O75525 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.25■■□□□ 1.15
KHDRBS3O75525 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
KHDRBS3O75525 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
KHDRBS3O75525 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
KHDRBS3O75525 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
KHDRBS3O75525 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
KHDRBS3O75525 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
KHDRBS3O75525 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.24■■□□□ 1.15
KHDRBS3O75525 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
KHDRBS3O75525 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
KHDRBS3O75525 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
KHDRBS3O75525 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.23■■□□□ 1.15
KHDRBS3O75525 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.23■■□□□ 1.15
KHDRBS3O75525 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
KHDRBS3O75525 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.23■■□□□ 1.15
KHDRBS3O75525 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
KHDRBS3O75525 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
KHDRBS3O75525 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
KHDRBS3O75525 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.22■■□□□ 1.15
KHDRBS3O75525 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.22■■□□□ 1.15
KHDRBS3O75525 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
KHDRBS3O75525 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
KHDRBS3O75525 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
KHDRBS3O75525 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
KHDRBS3O75525 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
KHDRBS3O75525 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
KHDRBS3O75525 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
KHDRBS3O75525 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.21■■□□□ 1.15
KHDRBS3O75525 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.21■■□□□ 1.15
KHDRBS3O75525 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.21■■□□□ 1.15
KHDRBS3O75525 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
KHDRBS3O75525 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
KHDRBS3O75525 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.21■■□□□ 1.15
KHDRBS3O75525 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
KHDRBS3O75525 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
KHDRBS3O75525 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
KHDRBS3O75525 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.19■■□□□ 1.14
KHDRBS3O75525 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.19■■□□□ 1.14
KHDRBS3O75525 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
KHDRBS3O75525 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
KHDRBS3O75525 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.18■■□□□ 1.14
KHDRBS3O75525 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KHDRBS3O75525 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KHDRBS3O75525 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
KHDRBS3O75525 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
KHDRBS3O75525 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.18■■□□□ 1.14
KHDRBS3O75525 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
KHDRBS3O75525 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.18■■□□□ 1.14
KHDRBS3O75525 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
KHDRBS3O75525 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KHDRBS3O75525 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.17■■□□□ 1.14
KHDRBS3O75525 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
KHDRBS3O75525 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.17■■□□□ 1.14
KHDRBS3O75525 LINC01971-201ENST00000617888 1048 ntBASIC22.17■■□□□ 1.14
KHDRBS3O75525 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
KHDRBS3O75525 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
KHDRBS3O75525 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
KHDRBS3O75525 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
KHDRBS3O75525 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
KHDRBS3O75525 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
KHDRBS3O75525 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KHDRBS3O75525 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KHDRBS3O75525 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
KHDRBS3O75525 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
KHDRBS3O75525 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.14■■□□□ 1.13
KHDRBS3O75525 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.14■■□□□ 1.13
KHDRBS3O75525 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
KHDRBS3O75525 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KHDRBS3O75525 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.13■■□□□ 1.13
KHDRBS3O75525 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.13■■□□□ 1.13
KHDRBS3O75525 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
KHDRBS3O75525 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.13■■□□□ 1.13
KHDRBS3O75525 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
KHDRBS3O75525 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
KHDRBS3O75525 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
KHDRBS3O75525 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.11■■□□□ 1.13
KHDRBS3O75525 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.11■■□□□ 1.13
KHDRBS3O75525 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.11■■□□□ 1.13
KHDRBS3O75525 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.11■■□□□ 1.13
KHDRBS3O75525 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
KHDRBS3O75525 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KHDRBS3O75525 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.1■■□□□ 1.13
KHDRBS3O75525 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.1■■□□□ 1.13
KHDRBS3O75525 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
KHDRBS3O75525 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
KHDRBS3O75525 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.1■■□□□ 1.13
KHDRBS3O75525 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
KHDRBS3O75525 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
KHDRBS3O75525 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms