Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC005559.1-201ENST00000589661 871 ntBASIC19.18■□□□□ 0.66
ZNF253O75346 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF253O75346 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ZNF253O75346 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF253O75346 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ZNF253O75346 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF253O75346 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF253O75346 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF253O75346 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
ZNF253O75346 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF253O75346 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ZNF253O75346 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF253O75346 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZNF253O75346 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.16■□□□□ 0.66
ZNF253O75346 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF253O75346 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF253O75346 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ZNF253O75346 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.16■□□□□ 0.66
ZNF253O75346 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ZNF253O75346 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF253O75346 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF253O75346 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF253O75346 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF253O75346 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF253O75346 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF253O75346 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF253O75346 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF253O75346 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF253O75346 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF253O75346 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.13■□□□□ 0.65
ZNF253O75346 LINC00273-201ENST00000539813 1452 ntBASIC19.13■□□□□ 0.65
ZNF253O75346 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF253O75346 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF253O75346 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ZNF253O75346 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF253O75346 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF253O75346 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF253O75346 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF253O75346 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ZNF253O75346 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF253O75346 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF253O75346 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.12■□□□□ 0.65
ZNF253O75346 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ZNF253O75346 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
ZNF253O75346 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.11■□□□□ 0.65
ZNF253O75346 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.11■□□□□ 0.65
ZNF253O75346 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF253O75346 WHAMMP2-203ENST00000563942 1603 ntBASIC19.11■□□□□ 0.65
ZNF253O75346 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.1■□□□□ 0.65
ZNF253O75346 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF253O75346 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF253O75346 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF253O75346 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF253O75346 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ZNF253O75346 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF253O75346 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF253O75346 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ZNF253O75346 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ZNF253O75346 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.09■□□□□ 0.65
ZNF253O75346 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF253O75346 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF253O75346 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ZNF253O75346 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF253O75346 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF253O75346 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF253O75346 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF253O75346 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF253O75346 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ZNF253O75346 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF253O75346 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ZNF253O75346 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF253O75346 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF253O75346 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF253O75346 SUZ12P1-203ENST00000578195 985 ntBASIC19.06■□□□□ 0.64
ZNF253O75346 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ZNF253O75346 AC093323.1-202ENST00000635031 2045 ntBASIC19.06■□□□□ 0.64
ZNF253O75346 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ZNF253O75346 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF253O75346 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.06■□□□□ 0.64
ZNF253O75346 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF253O75346 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF253O75346 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF253O75346 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF253O75346 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ZNF253O75346 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ZNF253O75346 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF253O75346 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF253O75346 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF253O75346 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF253O75346 AC020928.2-201ENST00000588717 2197 ntBASIC19.05■□□□□ 0.64
ZNF253O75346 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ZNF253O75346 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF253O75346 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF253O75346 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.04■□□□□ 0.64
ZNF253O75346 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF253O75346 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF253O75346 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF253O75346 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF253O75346 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF253O75346 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms