Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.59■■□□□ 1.85
TBC1D4O60343 AC012354.3-201ENST00000623734 483 ntBASIC26.59■■□□□ 1.85
TBC1D4O60343 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TBC1D4O60343 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TBC1D4O60343 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
TBC1D4O60343 AC018358.1-201ENST00000631079 1402 ntBASIC26.58■■□□□ 1.85
TBC1D4O60343 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.57■■□□□ 1.84
TBC1D4O60343 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TBC1D4O60343 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TBC1D4O60343 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.56■■□□□ 1.84
TBC1D4O60343 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
TBC1D4O60343 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TBC1D4O60343 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TBC1D4O60343 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.56■■□□□ 1.84
TBC1D4O60343 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TBC1D4O60343 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TBC1D4O60343 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TBC1D4O60343 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TBC1D4O60343 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TBC1D4O60343 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TBC1D4O60343 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TBC1D4O60343 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.55■■□□□ 1.84
TBC1D4O60343 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.55■■□□□ 1.84
TBC1D4O60343 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TBC1D4O60343 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TBC1D4O60343 KRT18P60-201ENST00000312876 1297 ntBASIC26.53■■□□□ 1.84
TBC1D4O60343 AC007029.1-201ENST00000604183 313 ntBASIC26.53■■□□□ 1.84
TBC1D4O60343 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.53■■□□□ 1.84
TBC1D4O60343 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TBC1D4O60343 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TBC1D4O60343 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TBC1D4O60343 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TBC1D4O60343 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TBC1D4O60343 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TBC1D4O60343 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
TBC1D4O60343 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
TBC1D4O60343 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TBC1D4O60343 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
TBC1D4O60343 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
TBC1D4O60343 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.51■■□□□ 1.83
TBC1D4O60343 AC025884.2-201ENST00000553429 711 ntBASIC26.51■■□□□ 1.83
TBC1D4O60343 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
TBC1D4O60343 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TBC1D4O60343 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TBC1D4O60343 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.5■■□□□ 1.83
TBC1D4O60343 SMPD5-203ENST00000639008 1464 ntBASIC26.49■■□□□ 1.83
TBC1D4O60343 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
TBC1D4O60343 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
TBC1D4O60343 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.49■■□□□ 1.83
TBC1D4O60343 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TBC1D4O60343 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TBC1D4O60343 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TBC1D4O60343 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
TBC1D4O60343 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.48■■□□□ 1.83
TBC1D4O60343 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TBC1D4O60343 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TBC1D4O60343 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.47■■□□□ 1.83
TBC1D4O60343 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TBC1D4O60343 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
TBC1D4O60343 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
TBC1D4O60343 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
TBC1D4O60343 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TBC1D4O60343 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.46■■□□□ 1.83
TBC1D4O60343 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TBC1D4O60343 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.45■■□□□ 1.82
TBC1D4O60343 AL033527.3-201ENST00000566366 1196 ntBASIC26.45■■□□□ 1.82
TBC1D4O60343 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.45■■□□□ 1.82
TBC1D4O60343 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
TBC1D4O60343 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
TBC1D4O60343 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TBC1D4O60343 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TBC1D4O60343 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TBC1D4O60343 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
TBC1D4O60343 AC009831.1-201ENST00000580420 1582 ntBASIC26.43■■□□□ 1.82
TBC1D4O60343 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
TBC1D4O60343 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TBC1D4O60343 AC004987.1-201ENST00000428627 508 ntBASIC26.42■■□□□ 1.82
TBC1D4O60343 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.42■■□□□ 1.82
TBC1D4O60343 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
TBC1D4O60343 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
TBC1D4O60343 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
TBC1D4O60343 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
TBC1D4O60343 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TBC1D4O60343 ATP5G2P3-201ENST00000429083 425 ntBASIC26.4■■□□□ 1.82
TBC1D4O60343 AC026202.3-201ENST00000600805 1127 ntBASIC26.4■■□□□ 1.82
TBC1D4O60343 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TBC1D4O60343 TSPY13P-201ENST00000338964 914 ntBASIC26.39■■□□□ 1.82
TBC1D4O60343 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.39■■□□□ 1.82
TBC1D4O60343 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
TBC1D4O60343 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.39■■□□□ 1.81
TBC1D4O60343 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.39■■□□□ 1.81
TBC1D4O60343 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TBC1D4O60343 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
TBC1D4O60343 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
TBC1D4O60343 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.38■■□□□ 1.81
TBC1D4O60343 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
TBC1D4O60343 AC133552.2-201ENST00000619106 1032 ntBASIC26.38■■□□□ 1.81
TBC1D4O60343 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TBC1D4O60343 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.38■■□□□ 1.81
TBC1D4O60343 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms