Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SSX5O60225 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX5O60225 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSX5O60225 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX5O60225 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX5O60225 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX5O60225 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SSX5O60225 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX5O60225 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSX5O60225 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.15■□□□□ 0.98
SSX5O60225 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SSX5O60225 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.15■□□□□ 0.98
SSX5O60225 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.15■□□□□ 0.98
SSX5O60225 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX5O60225 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSX5O60225 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSX5O60225 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSX5O60225 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SSX5O60225 MIR762-201ENST00000390236 83 ntBASIC21.14■□□□□ 0.97
SSX5O60225 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.14■□□□□ 0.97
SSX5O60225 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSX5O60225 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SSX5O60225 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
SSX5O60225 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.13■□□□□ 0.97
SSX5O60225 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SSX5O60225 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.13■□□□□ 0.97
SSX5O60225 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSX5O60225 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SSX5O60225 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SSX5O60225 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSX5O60225 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSX5O60225 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.12■□□□□ 0.97
SSX5O60225 AC097358.2-201ENST00000607541 1159 ntBASIC21.12■□□□□ 0.97
SSX5O60225 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SSX5O60225 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSX5O60225 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSX5O60225 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSX5O60225 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSX5O60225 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SSX5O60225 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSX5O60225 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSX5O60225 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.11■□□□□ 0.97
SSX5O60225 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SSX5O60225 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSX5O60225 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.1■□□□□ 0.97
SSX5O60225 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSX5O60225 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.1■□□□□ 0.97
SSX5O60225 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSX5O60225 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSX5O60225 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SSX5O60225 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.09■□□□□ 0.97
SSX5O60225 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.09■□□□□ 0.97
SSX5O60225 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSX5O60225 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSX5O60225 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SSX5O60225 DUSP8P4-201ENST00000399538 1761 ntBASIC21.08■□□□□ 0.97
SSX5O60225 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSX5O60225 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSX5O60225 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SSX5O60225 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SSX5O60225 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SSX5O60225 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SSX5O60225 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSX5O60225 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSX5O60225 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSX5O60225 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.07■□□□□ 0.96
SSX5O60225 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSX5O60225 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SSX5O60225 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSX5O60225 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSX5O60225 AC092803.2-201ENST00000564287 1899 ntBASIC21.07■□□□□ 0.96
SSX5O60225 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSX5O60225 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SSX5O60225 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
SSX5O60225 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.05■□□□□ 0.96
SSX5O60225 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSX5O60225 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SSX5O60225 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SSX5O60225 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSX5O60225 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.05■□□□□ 0.96
SSX5O60225 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSX5O60225 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SSX5O60225 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSX5O60225 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSX5O60225 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.04■□□□□ 0.96
SSX5O60225 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.04■□□□□ 0.96
SSX5O60225 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSX5O60225 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.04■□□□□ 0.96
SSX5O60225 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SSX5O60225 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.03■□□□□ 0.96
SSX5O60225 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SSX5O60225 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.03■□□□□ 0.96
SSX5O60225 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SSX5O60225 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SSX5O60225 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SSX5O60225 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SSX5O60225 LINC00273-201ENST00000539813 1452 ntBASIC21.02■□□□□ 0.96
SSX5O60225 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.02■□□□□ 0.96
SSX5O60225 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SSX5O60225 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms