Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
XRCC2O43543 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
XRCC2O43543 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
XRCC2O43543 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.58■■□□□ 1.05
XRCC2O43543 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
XRCC2O43543 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
XRCC2O43543 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.58■■□□□ 1.05
XRCC2O43543 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
XRCC2O43543 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
XRCC2O43543 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.57■■□□□ 1.04
XRCC2O43543 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
XRCC2O43543 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.57■■□□□ 1.04
XRCC2O43543 AC008813.1-201ENST00000536597 885 ntBASIC21.57■■□□□ 1.04
XRCC2O43543 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
XRCC2O43543 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.56■■□□□ 1.04
XRCC2O43543 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
XRCC2O43543 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
XRCC2O43543 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
XRCC2O43543 ABHD17AP4-201ENST00000411545 909 ntBASIC21.56■■□□□ 1.04
XRCC2O43543 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.56■■□□□ 1.04
XRCC2O43543 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.56■■□□□ 1.04
XRCC2O43543 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
XRCC2O43543 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
XRCC2O43543 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.55■■□□□ 1.04
XRCC2O43543 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
XRCC2O43543 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
XRCC2O43543 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.55■■□□□ 1.04
XRCC2O43543 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.55■■□□□ 1.04
XRCC2O43543 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
XRCC2O43543 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
XRCC2O43543 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
XRCC2O43543 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
XRCC2O43543 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.54■■□□□ 1.04
XRCC2O43543 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
XRCC2O43543 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.54■■□□□ 1.04
XRCC2O43543 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.53■■□□□ 1.04
XRCC2O43543 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.53■■□□□ 1.04
XRCC2O43543 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
XRCC2O43543 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
XRCC2O43543 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.52■■□□□ 1.04
XRCC2O43543 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
XRCC2O43543 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.52■■□□□ 1.04
XRCC2O43543 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.52■■□□□ 1.04
XRCC2O43543 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
XRCC2O43543 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
XRCC2O43543 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
XRCC2O43543 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
XRCC2O43543 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
XRCC2O43543 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
XRCC2O43543 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.51■■□□□ 1.03
XRCC2O43543 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XRCC2O43543 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XRCC2O43543 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XRCC2O43543 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XRCC2O43543 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
XRCC2O43543 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XRCC2O43543 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XRCC2O43543 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
XRCC2O43543 WHAMMP3-201ENST00000611636 1609 ntBASIC21.49■■□□□ 1.03
XRCC2O43543 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
XRCC2O43543 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
XRCC2O43543 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
XRCC2O43543 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
XRCC2O43543 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
XRCC2O43543 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.48■■□□□ 1.03
XRCC2O43543 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
XRCC2O43543 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.48■■□□□ 1.03
XRCC2O43543 AL449106.1-201ENST00000608517 1980 ntBASIC21.48■■□□□ 1.03
XRCC2O43543 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.48■■□□□ 1.03
XRCC2O43543 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
XRCC2O43543 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
XRCC2O43543 AC148477.6-201ENST00000623746 465 ntBASIC21.47■■□□□ 1.03
XRCC2O43543 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
XRCC2O43543 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
XRCC2O43543 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.46■■□□□ 1.03
XRCC2O43543 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
XRCC2O43543 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
XRCC2O43543 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.45■■□□□ 1.02
XRCC2O43543 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
XRCC2O43543 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.45■■□□□ 1.02
XRCC2O43543 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
XRCC2O43543 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
XRCC2O43543 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
XRCC2O43543 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
XRCC2O43543 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.45■■□□□ 1.02
XRCC2O43543 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
XRCC2O43543 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.45■■□□□ 1.02
XRCC2O43543 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
XRCC2O43543 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
XRCC2O43543 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.44■■□□□ 1.02
XRCC2O43543 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.44■■□□□ 1.02
XRCC2O43543 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
XRCC2O43543 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
XRCC2O43543 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
XRCC2O43543 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
XRCC2O43543 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
XRCC2O43543 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
XRCC2O43543 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
XRCC2O43543 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
XRCC2O43543 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms