Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.17■■□□□ 1.62
MID1O15344 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
MID1O15344 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
MID1O15344 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
MID1O15344 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
MID1O15344 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
MID1O15344 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
MID1O15344 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
MID1O15344 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
MID1O15344 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
MID1O15344 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
MID1O15344 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
MID1O15344 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
MID1O15344 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
MID1O15344 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.13■■□□□ 1.61
MID1O15344 AC018358.1-201ENST00000631079 1402 ntBASIC25.12■■□□□ 1.61
MID1O15344 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
MID1O15344 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
MID1O15344 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
MID1O15344 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.12■■□□□ 1.61
MID1O15344 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
MID1O15344 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
MID1O15344 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
MID1O15344 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
MID1O15344 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
MID1O15344 AC007029.1-201ENST00000604183 313 ntBASIC25.1■■□□□ 1.61
MID1O15344 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
MID1O15344 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
MID1O15344 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.1■■□□□ 1.61
MID1O15344 KRT18P60-201ENST00000312876 1297 ntBASIC25.09■■□□□ 1.61
MID1O15344 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
MID1O15344 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
MID1O15344 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.08■■□□□ 1.61
MID1O15344 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
MID1O15344 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.08■■□□□ 1.61
MID1O15344 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
MID1O15344 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
MID1O15344 SMPD5-203ENST00000639008 1464 ntBASIC25.08■■□□□ 1.6
MID1O15344 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.6
MID1O15344 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
MID1O15344 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
MID1O15344 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
MID1O15344 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
MID1O15344 AL033527.3-201ENST00000566366 1196 ntBASIC25.07■■□□□ 1.6
MID1O15344 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
MID1O15344 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
MID1O15344 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.06■■□□□ 1.6
MID1O15344 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
MID1O15344 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
MID1O15344 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
MID1O15344 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
MID1O15344 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.04■■□□□ 1.6
MID1O15344 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
MID1O15344 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
MID1O15344 AC139426.1-201ENST00000568218 2529 ntBASIC25.04■■□□□ 1.6
MID1O15344 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
MID1O15344 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
MID1O15344 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.02■■□□□ 1.6
MID1O15344 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
MID1O15344 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
MID1O15344 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.02■■□□□ 1.6
MID1O15344 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
MID1O15344 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
MID1O15344 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
MID1O15344 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.01■■□□□ 1.59
MID1O15344 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.01■■□□□ 1.59
MID1O15344 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
MID1O15344 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
MID1O15344 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.01■■□□□ 1.59
MID1O15344 AC025884.2-201ENST00000553429 711 ntBASIC25.01■■□□□ 1.59
MID1O15344 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
MID1O15344 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.01■■□□□ 1.59
MID1O15344 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25■■□□□ 1.59
MID1O15344 AC004987.1-201ENST00000428627 508 ntBASIC25■■□□□ 1.59
MID1O15344 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25■■□□□ 1.59
MID1O15344 AC009831.1-201ENST00000580420 1582 ntBASIC25■■□□□ 1.59
MID1O15344 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
MID1O15344 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
MID1O15344 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.99■■□□□ 1.59
MID1O15344 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
MID1O15344 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
MID1O15344 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
MID1O15344 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.99■■□□□ 1.59
MID1O15344 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
MID1O15344 TSPY13P-201ENST00000338964 914 ntBASIC24.98■■□□□ 1.59
MID1O15344 ATP5G2P3-201ENST00000429083 425 ntBASIC24.98■■□□□ 1.59
MID1O15344 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MID1O15344 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.98■■□□□ 1.59
MID1O15344 AC133552.2-201ENST00000619106 1032 ntBASIC24.98■■□□□ 1.59
MID1O15344 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
MID1O15344 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.97■■□□□ 1.59
MID1O15344 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.97■■□□□ 1.59
MID1O15344 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
MID1O15344 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
MID1O15344 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MID1O15344 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
MID1O15344 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.96■■□□□ 1.59
MID1O15344 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MID1O15344 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MID1O15344 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms