Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RBFOX3A6NFN3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RBFOX3A6NFN3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RBFOX3A6NFN3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RBFOX3A6NFN3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
RBFOX3A6NFN3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RBFOX3A6NFN3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RBFOX3A6NFN3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RBFOX3A6NFN3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RBFOX3A6NFN3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RBFOX3A6NFN3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RBFOX3A6NFN3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RBFOX3A6NFN3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RBFOX3A6NFN3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RBFOX3A6NFN3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.63■□□□□ 0.73
RBFOX3A6NFN3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RBFOX3A6NFN3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RBFOX3A6NFN3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RBFOX3A6NFN3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RBFOX3A6NFN3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RBFOX3A6NFN3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.62■□□□□ 0.73
RBFOX3A6NFN3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RBFOX3A6NFN3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RBFOX3A6NFN3 AC100797.4-201ENST00000631653 1827 ntBASIC19.62■□□□□ 0.73
RBFOX3A6NFN3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RBFOX3A6NFN3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RBFOX3A6NFN3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RBFOX3A6NFN3 AP002414.2-202ENST00000590929 1450 ntBASIC19.61■□□□□ 0.73
RBFOX3A6NFN3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RBFOX3A6NFN3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RBFOX3A6NFN3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RBFOX3A6NFN3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.6■□□□□ 0.73
RBFOX3A6NFN3 AC006077.2-201ENST00000623591 457 ntBASIC19.6■□□□□ 0.73
RBFOX3A6NFN3 WASH5P-204ENST00000632292 975 ntBASIC19.6■□□□□ 0.73
RBFOX3A6NFN3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RBFOX3A6NFN3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RBFOX3A6NFN3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RBFOX3A6NFN3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.6■□□□□ 0.73
RBFOX3A6NFN3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RBFOX3A6NFN3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RBFOX3A6NFN3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RBFOX3A6NFN3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
RBFOX3A6NFN3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RBFOX3A6NFN3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RBFOX3A6NFN3 AC012676.1-201ENST00000574705 1949 ntBASIC19.59■□□□□ 0.73
RBFOX3A6NFN3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RBFOX3A6NFN3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RBFOX3A6NFN3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.59■□□□□ 0.73
RBFOX3A6NFN3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.59■□□□□ 0.73
RBFOX3A6NFN3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RBFOX3A6NFN3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.58■□□□□ 0.73
RBFOX3A6NFN3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RBFOX3A6NFN3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RBFOX3A6NFN3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.58■□□□□ 0.72
RBFOX3A6NFN3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RBFOX3A6NFN3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RBFOX3A6NFN3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RBFOX3A6NFN3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.57■□□□□ 0.72
RBFOX3A6NFN3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RBFOX3A6NFN3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RBFOX3A6NFN3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RBFOX3A6NFN3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RBFOX3A6NFN3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.57■□□□□ 0.72
RBFOX3A6NFN3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RBFOX3A6NFN3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RBFOX3A6NFN3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RBFOX3A6NFN3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.56■□□□□ 0.72
RBFOX3A6NFN3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RBFOX3A6NFN3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RBFOX3A6NFN3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RBFOX3A6NFN3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RBFOX3A6NFN3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RBFOX3A6NFN3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RBFOX3A6NFN3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RBFOX3A6NFN3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.55■□□□□ 0.72
RBFOX3A6NFN3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RBFOX3A6NFN3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RBFOX3A6NFN3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RBFOX3A6NFN3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RBFOX3A6NFN3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RBFOX3A6NFN3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.54■□□□□ 0.72
RBFOX3A6NFN3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.54■□□□□ 0.72
RBFOX3A6NFN3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RBFOX3A6NFN3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RBFOX3A6NFN3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.52■□□□□ 0.72
RBFOX3A6NFN3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RBFOX3A6NFN3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RBFOX3A6NFN3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RBFOX3A6NFN3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RBFOX3A6NFN3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RBFOX3A6NFN3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
RBFOX3A6NFN3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RBFOX3A6NFN3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.51■□□□□ 0.71
RBFOX3A6NFN3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RBFOX3A6NFN3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RBFOX3A6NFN3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RBFOX3A6NFN3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RBFOX3A6NFN3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RBFOX3A6NFN3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RBFOX3A6NFN3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms