Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
TBC1D3FA6NER0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.01■■□□□ 1.59
TBC1D3FA6NER0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
TBC1D3FA6NER0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25■■□□□ 1.59
TBC1D3FA6NER0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TBC1D3FA6NER0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25■■□□□ 1.59
TBC1D3FA6NER0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25■■□□□ 1.59
TBC1D3FA6NER0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
TBC1D3FA6NER0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TBC1D3FA6NER0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TBC1D3FA6NER0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TBC1D3FA6NER0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TBC1D3FA6NER0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25■■□□□ 1.59
TBC1D3FA6NER0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.99■■□□□ 1.59
TBC1D3FA6NER0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TBC1D3FA6NER0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
TBC1D3FA6NER0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TBC1D3FA6NER0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TBC1D3FA6NER0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TBC1D3FA6NER0 AC018358.1-201ENST00000631079 1402 ntBASIC24.98■■□□□ 1.59
TBC1D3FA6NER0 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.98■■□□□ 1.59
TBC1D3FA6NER0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TBC1D3FA6NER0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TBC1D3FA6NER0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.97■■□□□ 1.59
TBC1D3FA6NER0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TBC1D3FA6NER0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TBC1D3FA6NER0 AL033527.3-201ENST00000566366 1196 ntBASIC24.97■■□□□ 1.59
TBC1D3FA6NER0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
TBC1D3FA6NER0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TBC1D3FA6NER0 SMPD5-203ENST00000639008 1464 ntBASIC24.96■■□□□ 1.59
TBC1D3FA6NER0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TBC1D3FA6NER0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.95■■□□□ 1.58
TBC1D3FA6NER0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TBC1D3FA6NER0 KRT18P60-201ENST00000312876 1297 ntBASIC24.94■■□□□ 1.58
TBC1D3FA6NER0 AC007029.1-201ENST00000604183 313 ntBASIC24.94■■□□□ 1.58
TBC1D3FA6NER0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
TBC1D3FA6NER0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TBC1D3FA6NER0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.93■■□□□ 1.58
TBC1D3FA6NER0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
TBC1D3FA6NER0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
TBC1D3FA6NER0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.93■■□□□ 1.58
TBC1D3FA6NER0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.92■■□□□ 1.58
TBC1D3FA6NER0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TBC1D3FA6NER0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TBC1D3FA6NER0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TBC1D3FA6NER0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TBC1D3FA6NER0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TBC1D3FA6NER0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TBC1D3FA6NER0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TBC1D3FA6NER0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.91■■□□□ 1.58
TBC1D3FA6NER0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TBC1D3FA6NER0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.9■■□□□ 1.58
TBC1D3FA6NER0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TBC1D3FA6NER0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TBC1D3FA6NER0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.9■■□□□ 1.58
TBC1D3FA6NER0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.9■■□□□ 1.58
TBC1D3FA6NER0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
TBC1D3FA6NER0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TBC1D3FA6NER0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TBC1D3FA6NER0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
TBC1D3FA6NER0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TBC1D3FA6NER0 AC133552.2-201ENST00000619106 1032 ntBASIC24.88■■□□□ 1.57
TBC1D3FA6NER0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
TBC1D3FA6NER0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
TBC1D3FA6NER0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.87■■□□□ 1.57
TBC1D3FA6NER0 TSPY13P-201ENST00000338964 914 ntBASIC24.87■■□□□ 1.57
TBC1D3FA6NER0 AC004987.1-201ENST00000428627 508 ntBASIC24.87■■□□□ 1.57
TBC1D3FA6NER0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TBC1D3FA6NER0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TBC1D3FA6NER0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.87■■□□□ 1.57
TBC1D3FA6NER0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
TBC1D3FA6NER0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TBC1D3FA6NER0 ATP5G2P3-201ENST00000429083 425 ntBASIC24.85■■□□□ 1.57
TBC1D3FA6NER0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.85■■□□□ 1.57
TBC1D3FA6NER0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
TBC1D3FA6NER0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.84■■□□□ 1.57
TBC1D3FA6NER0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TBC1D3FA6NER0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TBC1D3FA6NER0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.84■■□□□ 1.57
TBC1D3FA6NER0 AC009831.1-201ENST00000580420 1582 ntBASIC24.84■■□□□ 1.57
TBC1D3FA6NER0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TBC1D3FA6NER0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TBC1D3FA6NER0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TBC1D3FA6NER0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.83■■□□□ 1.57
TBC1D3FA6NER0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.83■■□□□ 1.57
TBC1D3FA6NER0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TBC1D3FA6NER0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TBC1D3FA6NER0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
TBC1D3FA6NER0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
TBC1D3FA6NER0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TBC1D3FA6NER0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
TBC1D3FA6NER0 AC025884.2-201ENST00000553429 711 ntBASIC24.82■■□□□ 1.56
TBC1D3FA6NER0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
TBC1D3FA6NER0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
TBC1D3FA6NER0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
TBC1D3FA6NER0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TBC1D3FA6NER0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.81■■□□□ 1.56
TBC1D3FA6NER0 AL592293.1-201ENST00000502889 1188 ntBASIC24.81■■□□□ 1.56
TBC1D3FA6NER0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TBC1D3FA6NER0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms