Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC39.24■■■■□ 3.87
PLEKHD1A6NEE1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC39.24■■■■□ 3.87
PLEKHD1A6NEE1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC39.24■■■■□ 3.87
PLEKHD1A6NEE1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC39.24■■■■□ 3.87
PLEKHD1A6NEE1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC39.24■■■■□ 3.87
PLEKHD1A6NEE1 AC100797.4-201ENST00000631653 1827 ntBASIC39.24■■■■□ 3.87
PLEKHD1A6NEE1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC39.23■■■■□ 3.87
PLEKHD1A6NEE1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
PLEKHD1A6NEE1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC39.23■■■■□ 3.87
PLEKHD1A6NEE1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC39.23■■■■□ 3.87
PLEKHD1A6NEE1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC39.23■■■■□ 3.87
PLEKHD1A6NEE1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC39.22■■■■□ 3.87
PLEKHD1A6NEE1 RP9P-202ENST00000450133 1212 ntBASIC39.22■■■■□ 3.87
PLEKHD1A6NEE1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC39.22■■■■□ 3.87
PLEKHD1A6NEE1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC39.22■■■■□ 3.87
PLEKHD1A6NEE1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
PLEKHD1A6NEE1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC39.21■■■■□ 3.87
PLEKHD1A6NEE1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC39.21■■■■□ 3.87
PLEKHD1A6NEE1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
PLEKHD1A6NEE1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
PLEKHD1A6NEE1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC39.19■■■■□ 3.86
PLEKHD1A6NEE1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
PLEKHD1A6NEE1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC39.19■■■■□ 3.86
PLEKHD1A6NEE1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC39.18■■■■□ 3.86
PLEKHD1A6NEE1 RAP2CP1-202ENST00000605179 643 ntBASIC39.18■■■■□ 3.86
PLEKHD1A6NEE1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC39.17■■■■□ 3.86
PLEKHD1A6NEE1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC39.16■■■■□ 3.86
PLEKHD1A6NEE1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC39.16■■■■□ 3.86
PLEKHD1A6NEE1 AC093536.1-201ENST00000569153 554 ntBASIC39.16■■■■□ 3.86
PLEKHD1A6NEE1 SPCS2P3-201ENST00000500401 656 ntBASIC39.15■■■■□ 3.86
PLEKHD1A6NEE1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC39.15■■■■□ 3.86
PLEKHD1A6NEE1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC39.15■■■■□ 3.86
PLEKHD1A6NEE1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
PLEKHD1A6NEE1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC39.14■■■■□ 3.86
PLEKHD1A6NEE1 ST7-AS1-201ENST00000456775 1889 ntBASIC39.13■■■■□ 3.86
PLEKHD1A6NEE1 AC010980.1-201ENST00000587192 1142 ntBASIC39.13■■■■□ 3.85
PLEKHD1A6NEE1 AC074183.2-201ENST00000623112 922 ntBASIC39.13■■■■□ 3.85
PLEKHD1A6NEE1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC39.13■■■■□ 3.85
PLEKHD1A6NEE1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC39.12■■■■□ 3.85
PLEKHD1A6NEE1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
PLEKHD1A6NEE1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC39.11■■■■□ 3.85
PLEKHD1A6NEE1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC39.11■■■■□ 3.85
PLEKHD1A6NEE1 BHLHE23-202ENST00000612929 1109 ntBASIC39.11■■■■□ 3.85
PLEKHD1A6NEE1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC39.11■■■■□ 3.85
PLEKHD1A6NEE1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC39.11■■■■□ 3.85
PLEKHD1A6NEE1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
PLEKHD1A6NEE1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
PLEKHD1A6NEE1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC39.09■■■■□ 3.85
PLEKHD1A6NEE1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
PLEKHD1A6NEE1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
PLEKHD1A6NEE1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
PLEKHD1A6NEE1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
PLEKHD1A6NEE1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC39.08■■■■□ 3.85
PLEKHD1A6NEE1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.85
PLEKHD1A6NEE1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC39.07■■■■□ 3.85
PLEKHD1A6NEE1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC39.07■■■■□ 3.85
PLEKHD1A6NEE1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC39.06■■■■□ 3.84
PLEKHD1A6NEE1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC39.06■■■■□ 3.84
PLEKHD1A6NEE1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
PLEKHD1A6NEE1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
PLEKHD1A6NEE1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC39.06■■■■□ 3.84
PLEKHD1A6NEE1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC39.05■■■■□ 3.84
PLEKHD1A6NEE1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC39.05■■■■□ 3.84
PLEKHD1A6NEE1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC39.05■■■■□ 3.84
PLEKHD1A6NEE1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
PLEKHD1A6NEE1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC39.04■■■■□ 3.84
PLEKHD1A6NEE1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC39.03■■■■□ 3.84
PLEKHD1A6NEE1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC39.03■■■■□ 3.84
PLEKHD1A6NEE1 KRT8P33-201ENST00000508125 1423 ntBASIC39.02■■■■□ 3.84
PLEKHD1A6NEE1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC39.02■■■■□ 3.84
PLEKHD1A6NEE1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
PLEKHD1A6NEE1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC39.01■■■■□ 3.84
PLEKHD1A6NEE1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC39.01■■■■□ 3.84
PLEKHD1A6NEE1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC39.01■■■■□ 3.84
PLEKHD1A6NEE1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
PLEKHD1A6NEE1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
PLEKHD1A6NEE1 AL592295.1-201ENST00000400984 884 ntBASIC39■■■■□ 3.83
PLEKHD1A6NEE1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC39■■■■□ 3.83
PLEKHD1A6NEE1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
PLEKHD1A6NEE1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC39■■■■□ 3.83
PLEKHD1A6NEE1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
PLEKHD1A6NEE1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC38.99■■■■□ 3.83
PLEKHD1A6NEE1 AC103834.1-201ENST00000520383 144 ntBASIC38.99■■■■□ 3.83
PLEKHD1A6NEE1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC38.99■■■■□ 3.83
PLEKHD1A6NEE1 MIR3960-201ENST00000583311 91 ntBASIC38.99■■■■□ 3.83
PLEKHD1A6NEE1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC38.99■■■■□ 3.83
PLEKHD1A6NEE1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC38.98■■■■□ 3.83
PLEKHD1A6NEE1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC38.98■■■■□ 3.83
PLEKHD1A6NEE1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
PLEKHD1A6NEE1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC38.98■■■■□ 3.83
PLEKHD1A6NEE1 AC009299.2-201ENST00000482477 511 ntBASIC38.98■■■■□ 3.83
PLEKHD1A6NEE1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
PLEKHD1A6NEE1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC38.98■■■■□ 3.83
PLEKHD1A6NEE1 MIR6765-201ENST00000614092 87 ntBASIC38.98■■■■□ 3.83
PLEKHD1A6NEE1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC38.97■■■■□ 3.83
PLEKHD1A6NEE1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC38.95■■■■□ 3.83
PLEKHD1A6NEE1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
PLEKHD1A6NEE1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC38.95■■■■□ 3.83
PLEKHD1A6NEE1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
PLEKHD1A6NEE1 AC139795.1-202ENST00000500444 432 ntBASIC38.94■■■■□ 3.82
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms