Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TCRBV9S1A1TA0A576 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TCRBV9S1A1TA0A576 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TCRBV9S1A1TA0A576 AC087741.3-201ENST00000624270 1347 ntBASIC25.12■■□□□ 1.61
TCRBV9S1A1TA0A576 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
TCRBV9S1A1TA0A576 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TCRBV9S1A1TA0A576 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.11■■□□□ 1.61
TCRBV9S1A1TA0A576 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TCRBV9S1A1TA0A576 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.11■■□□□ 1.61
TCRBV9S1A1TA0A576 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TCRBV9S1A1TA0A576 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TCRBV9S1A1TA0A576 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TCRBV9S1A1TA0A576 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.09■■□□□ 1.61
TCRBV9S1A1TA0A576 AP004609.3-201ENST00000610705 1884 ntBASIC25.09■■□□□ 1.61
TCRBV9S1A1TA0A576 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.09■■□□□ 1.61
TCRBV9S1A1TA0A576 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
TCRBV9S1A1TA0A576 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TCRBV9S1A1TA0A576 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TCRBV9S1A1TA0A576 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TCRBV9S1A1TA0A576 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
TCRBV9S1A1TA0A576 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.07■■□□□ 1.6
TCRBV9S1A1TA0A576 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TCRBV9S1A1TA0A576 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.07■■□□□ 1.6
TCRBV9S1A1TA0A576 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.07■■□□□ 1.6
TCRBV9S1A1TA0A576 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.07■■□□□ 1.6
TCRBV9S1A1TA0A576 AC110285.7-201ENST00000624417 1536 ntBASIC25.07■■□□□ 1.6
TCRBV9S1A1TA0A576 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.06■■□□□ 1.6
TCRBV9S1A1TA0A576 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
TCRBV9S1A1TA0A576 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TCRBV9S1A1TA0A576 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TCRBV9S1A1TA0A576 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TCRBV9S1A1TA0A576 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.04■■□□□ 1.6
TCRBV9S1A1TA0A576 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
TCRBV9S1A1TA0A576 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TCRBV9S1A1TA0A576 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
TCRBV9S1A1TA0A576 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.03■■□□□ 1.6
TCRBV9S1A1TA0A576 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.02■■□□□ 1.6
TCRBV9S1A1TA0A576 AC092803.2-201ENST00000564287 1899 ntBASIC25.02■■□□□ 1.6
TCRBV9S1A1TA0A576 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.02■■□□□ 1.6
TCRBV9S1A1TA0A576 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
TCRBV9S1A1TA0A576 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TCRBV9S1A1TA0A576 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.02■■□□□ 1.6
TCRBV9S1A1TA0A576 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TCRBV9S1A1TA0A576 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.01■■□□□ 1.59
TCRBV9S1A1TA0A576 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TCRBV9S1A1TA0A576 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.01■■□□□ 1.59
TCRBV9S1A1TA0A576 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
TCRBV9S1A1TA0A576 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TCRBV9S1A1TA0A576 AL162393.1-201ENST00000437852 946 ntBASIC25.01■■□□□ 1.59
TCRBV9S1A1TA0A576 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.01■■□□□ 1.59
TCRBV9S1A1TA0A576 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
TCRBV9S1A1TA0A576 AC020928.2-201ENST00000588717 2197 ntBASIC25.01■■□□□ 1.59
TCRBV9S1A1TA0A576 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TCRBV9S1A1TA0A576 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
TCRBV9S1A1TA0A576 DUSP8P4-201ENST00000399538 1761 ntBASIC25■■□□□ 1.59
TCRBV9S1A1TA0A576 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
TCRBV9S1A1TA0A576 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25■■□□□ 1.59
TCRBV9S1A1TA0A576 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TCRBV9S1A1TA0A576 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TCRBV9S1A1TA0A576 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
TCRBV9S1A1TA0A576 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.99■■□□□ 1.59
TCRBV9S1A1TA0A576 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
TCRBV9S1A1TA0A576 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
TCRBV9S1A1TA0A576 AC044849.2-201ENST00000606596 710 ntBASIC24.98■■□□□ 1.59
TCRBV9S1A1TA0A576 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TCRBV9S1A1TA0A576 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TCRBV9S1A1TA0A576 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TCRBV9S1A1TA0A576 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TCRBV9S1A1TA0A576 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TCRBV9S1A1TA0A576 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TCRBV9S1A1TA0A576 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.97■■□□□ 1.59
TCRBV9S1A1TA0A576 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TCRBV9S1A1TA0A576 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.96■■□□□ 1.59
TCRBV9S1A1TA0A576 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.96■■□□□ 1.59
TCRBV9S1A1TA0A576 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
TCRBV9S1A1TA0A576 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
TCRBV9S1A1TA0A576 AC142472.1-201ENST00000612013 1741 ntBASIC24.95■■□□□ 1.59
TCRBV9S1A1TA0A576 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TCRBV9S1A1TA0A576 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TCRBV9S1A1TA0A576 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
TCRBV9S1A1TA0A576 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.95■■□□□ 1.58
TCRBV9S1A1TA0A576 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TCRBV9S1A1TA0A576 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TCRBV9S1A1TA0A576 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TCRBV9S1A1TA0A576 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TCRBV9S1A1TA0A576 WHAMMP3-201ENST00000611636 1609 ntBASIC24.94■■□□□ 1.58
TCRBV9S1A1TA0A576 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TCRBV9S1A1TA0A576 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
TCRBV9S1A1TA0A576 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TCRBV9S1A1TA0A576 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TCRBV9S1A1TA0A576 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TCRBV9S1A1TA0A576 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TCRBV9S1A1TA0A576 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TCRBV9S1A1TA0A576 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.92■■□□□ 1.58
TCRBV9S1A1TA0A576 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TCRBV9S1A1TA0A576 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TCRBV9S1A1TA0A576 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.91■■□□□ 1.58
TCRBV9S1A1TA0A576 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TCRBV9S1A1TA0A576 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.91■■□□□ 1.58
TCRBV9S1A1TA0A576 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms