Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.78■■□□□ 1.4
RNF103-CHMP3A0A140T963 AC044849.2-201ENST00000606596 710 ntBASIC23.78■■□□□ 1.4
RNF103-CHMP3A0A140T963 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF103-CHMP3A0A140T963 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.77■■□□□ 1.4
RNF103-CHMP3A0A140T963 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF103-CHMP3A0A140T963 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF103-CHMP3A0A140T963 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RNF103-CHMP3A0A140T963 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF103-CHMP3A0A140T963 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF103-CHMP3A0A140T963 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF103-CHMP3A0A140T963 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF103-CHMP3A0A140T963 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.75■■□□□ 1.39
RNF103-CHMP3A0A140T963 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RNF103-CHMP3A0A140T963 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF103-CHMP3A0A140T963 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF103-CHMP3A0A140T963 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF103-CHMP3A0A140T963 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.75■■□□□ 1.39
RNF103-CHMP3A0A140T963 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF103-CHMP3A0A140T963 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.73■■□□□ 1.39
RNF103-CHMP3A0A140T963 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF103-CHMP3A0A140T963 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF103-CHMP3A0A140T963 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.73■■□□□ 1.39
RNF103-CHMP3A0A140T963 AC018358.1-201ENST00000631079 1402 ntBASIC23.73■■□□□ 1.39
RNF103-CHMP3A0A140T963 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF103-CHMP3A0A140T963 AC091060.1-201ENST00000623524 1766 ntBASIC23.73■■□□□ 1.39
RNF103-CHMP3A0A140T963 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
RNF103-CHMP3A0A140T963 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF103-CHMP3A0A140T963 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF103-CHMP3A0A140T963 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF103-CHMP3A0A140T963 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF103-CHMP3A0A140T963 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF103-CHMP3A0A140T963 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF103-CHMP3A0A140T963 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF103-CHMP3A0A140T963 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF103-CHMP3A0A140T963 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF103-CHMP3A0A140T963 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF103-CHMP3A0A140T963 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF103-CHMP3A0A140T963 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RNF103-CHMP3A0A140T963 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RNF103-CHMP3A0A140T963 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF103-CHMP3A0A140T963 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.71■■□□□ 1.39
RNF103-CHMP3A0A140T963 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.71■■□□□ 1.39
RNF103-CHMP3A0A140T963 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF103-CHMP3A0A140T963 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
RNF103-CHMP3A0A140T963 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF103-CHMP3A0A140T963 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
RNF103-CHMP3A0A140T963 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RNF103-CHMP3A0A140T963 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
RNF103-CHMP3A0A140T963 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
RNF103-CHMP3A0A140T963 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF103-CHMP3A0A140T963 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF103-CHMP3A0A140T963 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF103-CHMP3A0A140T963 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF103-CHMP3A0A140T963 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
RNF103-CHMP3A0A140T963 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF103-CHMP3A0A140T963 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF103-CHMP3A0A140T963 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF103-CHMP3A0A140T963 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF103-CHMP3A0A140T963 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF103-CHMP3A0A140T963 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF103-CHMP3A0A140T963 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF103-CHMP3A0A140T963 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
RNF103-CHMP3A0A140T963 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
RNF103-CHMP3A0A140T963 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
RNF103-CHMP3A0A140T963 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF103-CHMP3A0A140T963 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF103-CHMP3A0A140T963 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF103-CHMP3A0A140T963 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
RNF103-CHMP3A0A140T963 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF103-CHMP3A0A140T963 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
RNF103-CHMP3A0A140T963 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RNF103-CHMP3A0A140T963 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF103-CHMP3A0A140T963 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RNF103-CHMP3A0A140T963 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF103-CHMP3A0A140T963 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF103-CHMP3A0A140T963 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF103-CHMP3A0A140T963 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF103-CHMP3A0A140T963 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.63■■□□□ 1.37
RNF103-CHMP3A0A140T963 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF103-CHMP3A0A140T963 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF103-CHMP3A0A140T963 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
RNF103-CHMP3A0A140T963 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF103-CHMP3A0A140T963 AC020928.2-201ENST00000588717 2197 ntBASIC23.62■■□□□ 1.37
RNF103-CHMP3A0A140T963 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF103-CHMP3A0A140T963 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF103-CHMP3A0A140T963 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF103-CHMP3A0A140T963 AC021231.2-201ENST00000594613 730 ntBASIC23.61■■□□□ 1.37
RNF103-CHMP3A0A140T963 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
RNF103-CHMP3A0A140T963 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
RNF103-CHMP3A0A140T963 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
RNF103-CHMP3A0A140T963 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF103-CHMP3A0A140T963 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.6■■□□□ 1.37
RNF103-CHMP3A0A140T963 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF103-CHMP3A0A140T963 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF103-CHMP3A0A140T963 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
RNF103-CHMP3A0A140T963 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF103-CHMP3A0A140T963 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF103-CHMP3A0A140T963 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF103-CHMP3A0A140T963 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF103-CHMP3A0A140T963 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms