Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.78■□□□□ 0.44
TRGV4A0A0C4DH28 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRGV4A0A0C4DH28 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRGV4A0A0C4DH28 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRGV4A0A0C4DH28 ABHD17AP4-201ENST00000411545 909 ntBASIC17.78■□□□□ 0.44
TRGV4A0A0C4DH28 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.78■□□□□ 0.44
TRGV4A0A0C4DH28 DUX4L11-201ENST00000611504 1267 ntBASIC17.78■□□□□ 0.44
TRGV4A0A0C4DH28 DUX4L12-201ENST00000614593 1267 ntBASIC17.78■□□□□ 0.44
TRGV4A0A0C4DH28 DUX4L14-201ENST00000621227 1267 ntBASIC17.78■□□□□ 0.44
TRGV4A0A0C4DH28 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRGV4A0A0C4DH28 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRGV4A0A0C4DH28 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRGV4A0A0C4DH28 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRGV4A0A0C4DH28 DUX4L13-201ENST00000554103 1267 ntBASIC17.77■□□□□ 0.44
TRGV4A0A0C4DH28 DUX4L15-201ENST00000611059 1267 ntBASIC17.77■□□□□ 0.44
TRGV4A0A0C4DH28 DUX4L23-201ENST00000615195 1269 ntBASIC17.77■□□□□ 0.44
TRGV4A0A0C4DH28 DUX4L24-201ENST00000617576 1269 ntBASIC17.77■□□□□ 0.44
TRGV4A0A0C4DH28 DUX4L22-201ENST00000618238 1269 ntBASIC17.77■□□□□ 0.44
TRGV4A0A0C4DH28 DUX4L20-201ENST00000619712 1269 ntBASIC17.77■□□□□ 0.44
TRGV4A0A0C4DH28 DUX4L21-201ENST00000622058 1269 ntBASIC17.77■□□□□ 0.44
TRGV4A0A0C4DH28 DUX4L10-201ENST00000622460 1267 ntBASIC17.77■□□□□ 0.44
TRGV4A0A0C4DH28 DUX4L25-201ENST00000624915 1269 ntBASIC17.77■□□□□ 0.44
TRGV4A0A0C4DH28 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRGV4A0A0C4DH28 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRGV4A0A0C4DH28 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.76■□□□□ 0.43
TRGV4A0A0C4DH28 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRGV4A0A0C4DH28 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRGV4A0A0C4DH28 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRGV4A0A0C4DH28 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRGV4A0A0C4DH28 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.75■□□□□ 0.43
TRGV4A0A0C4DH28 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRGV4A0A0C4DH28 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRGV4A0A0C4DH28 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRGV4A0A0C4DH28 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.73■□□□□ 0.43
TRGV4A0A0C4DH28 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.73■□□□□ 0.43
TRGV4A0A0C4DH28 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRGV4A0A0C4DH28 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRGV4A0A0C4DH28 AL121749.1-202ENST00000609313 2153 ntBASIC17.73■□□□□ 0.43
TRGV4A0A0C4DH28 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV4A0A0C4DH28 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV4A0A0C4DH28 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRGV4A0A0C4DH28 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV4A0A0C4DH28 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV4A0A0C4DH28 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.72■□□□□ 0.43
TRGV4A0A0C4DH28 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV4A0A0C4DH28 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV4A0A0C4DH28 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV4A0A0C4DH28 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRGV4A0A0C4DH28 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV4A0A0C4DH28 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV4A0A0C4DH28 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.71■□□□□ 0.43
TRGV4A0A0C4DH28 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV4A0A0C4DH28 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.7■□□□□ 0.42
TRGV4A0A0C4DH28 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV4A0A0C4DH28 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRGV4A0A0C4DH28 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV4A0A0C4DH28 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRGV4A0A0C4DH28 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV4A0A0C4DH28 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
TRGV4A0A0C4DH28 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV4A0A0C4DH28 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV4A0A0C4DH28 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRGV4A0A0C4DH28 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.69■□□□□ 0.42
TRGV4A0A0C4DH28 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRGV4A0A0C4DH28 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV4A0A0C4DH28 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.69■□□□□ 0.42
TRGV4A0A0C4DH28 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.69■□□□□ 0.42
TRGV4A0A0C4DH28 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.69■□□□□ 0.42
TRGV4A0A0C4DH28 AC008813.1-201ENST00000536597 885 ntBASIC17.69■□□□□ 0.42
TRGV4A0A0C4DH28 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV4A0A0C4DH28 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV4A0A0C4DH28 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV4A0A0C4DH28 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV4A0A0C4DH28 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRGV4A0A0C4DH28 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV4A0A0C4DH28 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.68■□□□□ 0.42
TRGV4A0A0C4DH28 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV4A0A0C4DH28 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV4A0A0C4DH28 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV4A0A0C4DH28 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV4A0A0C4DH28 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.67■□□□□ 0.42
TRGV4A0A0C4DH28 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV4A0A0C4DH28 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.67■□□□□ 0.42
TRGV4A0A0C4DH28 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV4A0A0C4DH28 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV4A0A0C4DH28 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRGV4A0A0C4DH28 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV4A0A0C4DH28 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV4A0A0C4DH28 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV4A0A0C4DH28 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRGV4A0A0C4DH28 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRGV4A0A0C4DH28 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV4A0A0C4DH28 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV4A0A0C4DH28 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV4A0A0C4DH28 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV4A0A0C4DH28 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV4A0A0C4DH28 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV4A0A0C4DH28 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TRGV4A0A0C4DH28 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.64■□□□□ 0.41
TRGV4A0A0C4DH28 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms