Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAV5A0A0B4J249 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV5A0A0B4J249 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAV5A0A0B4J249 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV5A0A0B4J249 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV5A0A0B4J249 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.28■□□□□ 0.68
TRAV5A0A0B4J249 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV5A0A0B4J249 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV5A0A0B4J249 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV5A0A0B4J249 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV5A0A0B4J249 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV5A0A0B4J249 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRAV5A0A0B4J249 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV5A0A0B4J249 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.27■□□□□ 0.68
TRAV5A0A0B4J249 AC005559.1-201ENST00000589661 871 ntBASIC19.27■□□□□ 0.68
TRAV5A0A0B4J249 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV5A0A0B4J249 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TRAV5A0A0B4J249 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV5A0A0B4J249 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAV5A0A0B4J249 MIR6090-201ENST00000622481 60 ntBASIC19.26■□□□□ 0.67
TRAV5A0A0B4J249 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAV5A0A0B4J249 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV5A0A0B4J249 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV5A0A0B4J249 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV5A0A0B4J249 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV5A0A0B4J249 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV5A0A0B4J249 LINC00273-201ENST00000539813 1452 ntBASIC19.24■□□□□ 0.67
TRAV5A0A0B4J249 AC108673.1-201ENST00000510422 1159 ntBASIC19.24■□□□□ 0.67
TRAV5A0A0B4J249 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV5A0A0B4J249 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRAV5A0A0B4J249 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV5A0A0B4J249 AC092803.2-201ENST00000564287 1899 ntBASIC19.24■□□□□ 0.67
TRAV5A0A0B4J249 AP004609.3-201ENST00000610705 1884 ntBASIC19.24■□□□□ 0.67
TRAV5A0A0B4J249 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRAV5A0A0B4J249 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV5A0A0B4J249 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV5A0A0B4J249 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV5A0A0B4J249 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV5A0A0B4J249 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV5A0A0B4J249 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRAV5A0A0B4J249 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV5A0A0B4J249 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV5A0A0B4J249 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV5A0A0B4J249 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
TRAV5A0A0B4J249 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV5A0A0B4J249 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRAV5A0A0B4J249 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV5A0A0B4J249 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRAV5A0A0B4J249 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV5A0A0B4J249 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV5A0A0B4J249 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV5A0A0B4J249 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
TRAV5A0A0B4J249 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV5A0A0B4J249 DUSP8P4-201ENST00000399538 1761 ntBASIC19.2■□□□□ 0.66
TRAV5A0A0B4J249 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV5A0A0B4J249 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV5A0A0B4J249 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV5A0A0B4J249 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV5A0A0B4J249 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV5A0A0B4J249 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRAV5A0A0B4J249 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV5A0A0B4J249 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV5A0A0B4J249 SUZ12P1-203ENST00000578195 985 ntBASIC19.19■□□□□ 0.66
TRAV5A0A0B4J249 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV5A0A0B4J249 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
TRAV5A0A0B4J249 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAV5A0A0B4J249 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV5A0A0B4J249 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV5A0A0B4J249 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV5A0A0B4J249 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV5A0A0B4J249 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV5A0A0B4J249 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.18■□□□□ 0.66
TRAV5A0A0B4J249 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV5A0A0B4J249 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRAV5A0A0B4J249 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV5A0A0B4J249 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV5A0A0B4J249 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV5A0A0B4J249 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRAV5A0A0B4J249 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV5A0A0B4J249 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRAV5A0A0B4J249 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV5A0A0B4J249 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV5A0A0B4J249 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV5A0A0B4J249 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV5A0A0B4J249 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.16■□□□□ 0.66
TRAV5A0A0B4J249 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV5A0A0B4J249 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV5A0A0B4J249 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV5A0A0B4J249 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
TRAV5A0A0B4J249 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.15■□□□□ 0.66
TRAV5A0A0B4J249 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV5A0A0B4J249 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAV5A0A0B4J249 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV5A0A0B4J249 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV5A0A0B4J249 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV5A0A0B4J249 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV5A0A0B4J249 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV5A0A0B4J249 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV5A0A0B4J249 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV5A0A0B4J249 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms