Protein–RNA interactions for Protein: A0A075B6T6

TRAV12-2, T-cell receptor alpha variable 12-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2A0A075B6T6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV12-2A0A075B6T6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV12-2A0A075B6T6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV12-2A0A075B6T6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV12-2A0A075B6T6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV12-2A0A075B6T6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV12-2A0A075B6T6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV12-2A0A075B6T6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV12-2A0A075B6T6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRAV12-2A0A075B6T6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV12-2A0A075B6T6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.41■□□□□ 0.54
TRAV12-2A0A075B6T6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV12-2A0A075B6T6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV12-2A0A075B6T6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV12-2A0A075B6T6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRAV12-2A0A075B6T6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRAV12-2A0A075B6T6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV12-2A0A075B6T6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRAV12-2A0A075B6T6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV12-2A0A075B6T6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV12-2A0A075B6T6 DUX4L11-201ENST00000611504 1267 ntBASIC18.4■□□□□ 0.54
TRAV12-2A0A075B6T6 DUX4L12-201ENST00000614593 1267 ntBASIC18.4■□□□□ 0.54
TRAV12-2A0A075B6T6 DUX4L14-201ENST00000621227 1267 ntBASIC18.4■□□□□ 0.54
TRAV12-2A0A075B6T6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV12-2A0A075B6T6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV12-2A0A075B6T6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.39■□□□□ 0.54
TRAV12-2A0A075B6T6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV12-2A0A075B6T6 DUX4L13-201ENST00000554103 1267 ntBASIC18.39■□□□□ 0.53
TRAV12-2A0A075B6T6 DUX4L15-201ENST00000611059 1267 ntBASIC18.39■□□□□ 0.53
TRAV12-2A0A075B6T6 DUX4L23-201ENST00000615195 1269 ntBASIC18.39■□□□□ 0.53
TRAV12-2A0A075B6T6 DUX4L24-201ENST00000617576 1269 ntBASIC18.39■□□□□ 0.53
TRAV12-2A0A075B6T6 DUX4L22-201ENST00000618238 1269 ntBASIC18.39■□□□□ 0.53
TRAV12-2A0A075B6T6 DUX4L20-201ENST00000619712 1269 ntBASIC18.39■□□□□ 0.53
TRAV12-2A0A075B6T6 DUX4L21-201ENST00000622058 1269 ntBASIC18.39■□□□□ 0.53
TRAV12-2A0A075B6T6 DUX4L10-201ENST00000622460 1267 ntBASIC18.39■□□□□ 0.53
TRAV12-2A0A075B6T6 DUX4L25-201ENST00000624915 1269 ntBASIC18.39■□□□□ 0.53
TRAV12-2A0A075B6T6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV12-2A0A075B6T6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAV12-2A0A075B6T6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV12-2A0A075B6T6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
TRAV12-2A0A075B6T6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV12-2A0A075B6T6 ABHD17AP4-201ENST00000411545 909 ntBASIC18.38■□□□□ 0.53
TRAV12-2A0A075B6T6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRAV12-2A0A075B6T6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRAV12-2A0A075B6T6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV12-2A0A075B6T6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV12-2A0A075B6T6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV12-2A0A075B6T6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV12-2A0A075B6T6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV12-2A0A075B6T6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV12-2A0A075B6T6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
TRAV12-2A0A075B6T6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRAV12-2A0A075B6T6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV12-2A0A075B6T6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV12-2A0A075B6T6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TRAV12-2A0A075B6T6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV12-2A0A075B6T6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV12-2A0A075B6T6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV12-2A0A075B6T6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TRAV12-2A0A075B6T6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TRAV12-2A0A075B6T6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV12-2A0A075B6T6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV12-2A0A075B6T6 AL449106.1-201ENST00000608517 1980 ntBASIC18.33■□□□□ 0.52
TRAV12-2A0A075B6T6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV12-2A0A075B6T6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV12-2A0A075B6T6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV12-2A0A075B6T6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV12-2A0A075B6T6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV12-2A0A075B6T6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV12-2A0A075B6T6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV12-2A0A075B6T6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV12-2A0A075B6T6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV12-2A0A075B6T6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV12-2A0A075B6T6 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV12-2A0A075B6T6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV12-2A0A075B6T6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.31■□□□□ 0.52
TRAV12-2A0A075B6T6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV12-2A0A075B6T6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV12-2A0A075B6T6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV12-2A0A075B6T6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV12-2A0A075B6T6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV12-2A0A075B6T6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TRAV12-2A0A075B6T6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV12-2A0A075B6T6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV12-2A0A075B6T6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV12-2A0A075B6T6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV12-2A0A075B6T6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV12-2A0A075B6T6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV12-2A0A075B6T6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV12-2A0A075B6T6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV12-2A0A075B6T6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV12-2A0A075B6T6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV12-2A0A075B6T6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
TRAV12-2A0A075B6T6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV12-2A0A075B6T6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV12-2A0A075B6T6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV12-2A0A075B6T6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRAV12-2A0A075B6T6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TRAV12-2A0A075B6T6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TRAV12-2A0A075B6T6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms