Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCA3PQ9Y6N3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCA3PQ9Y6N3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
CLCA3PQ9Y6N3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCA3PQ9Y6N3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCA3PQ9Y6N3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCA3PQ9Y6N3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLCA3PQ9Y6N3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 MIR564-202ENST00000385049 94 ntBASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 AC139887.4-201ENST00000607877 719 ntBASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CLCA3PQ9Y6N3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 AK4P3-201ENST00000418260 669 ntBASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 AC034236.2-201ENST00000606662 1610 ntBASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCA3PQ9Y6N3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 AL357033.4-201ENST00000617703 1807 ntBASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 AC018470.1-201ENST00000624790 3129 ntBASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 YBX1P2-201ENST00000489612 999 ntBASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms