Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC055717.3-201ENST00000622967 595 ntBASIC27.8■■■□□ 2.04
CDC42BPBQ9Y5S2 AL139288.1-201ENST00000623748 933 ntBASIC27.8■■■□□ 2.04
CDC42BPBQ9Y5S2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
CDC42BPBQ9Y5S2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 AC009533.2-201ENST00000543664 586 ntBASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
CDC42BPBQ9Y5S2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 HMGN1P19-201ENST00000436976 333 ntBASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 AC009154.2-201ENST00000621177 724 ntBASIC27.78■■■□□ 2.04
CDC42BPBQ9Y5S2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 AL161938.1-201ENST00000569833 2180 ntBASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 Z83851.2-201ENST00000609564 659 ntBASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 AC008735.5-201ENST00000623544 497 ntBASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 AC083906.6-201ENST00000641366 219 ntBASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPBQ9Y5S2 AL032819.2-201ENST00000624543 2162 ntBASIC27.76■■■□□ 2.04
CDC42BPBQ9Y5S2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC27.76■■■□□ 2.04
CDC42BPBQ9Y5S2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
CDC42BPBQ9Y5S2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CDC42BPBQ9Y5S2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CDC42BPBQ9Y5S2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CDC42BPBQ9Y5S2 FAM220CP-201ENST00000395253 831 ntBASIC27.76■■■□□ 2.03
CDC42BPBQ9Y5S2 BID-204ENST00000399767 2129 ntTSL 2 BASIC27.76■■■□□ 2.03
CDC42BPBQ9Y5S2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC27.76■■■□□ 2.03
CDC42BPBQ9Y5S2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC27.76■■■□□ 2.03
CDC42BPBQ9Y5S2 OR7E14P-202ENST00000530490 1290 ntBASIC27.76■■■□□ 2.03
CDC42BPBQ9Y5S2 FAM197Y3-203ENST00000618346 717 ntBASIC27.76■■■□□ 2.03
CDC42BPBQ9Y5S2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CDC42BPBQ9Y5S2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC27.76■■■□□ 2.03
CDC42BPBQ9Y5S2 AL049812.1-201ENST00000432563 2267 ntBASIC27.76■■■□□ 2.03
CDC42BPBQ9Y5S2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 MED15P5-201ENST00000423150 992 ntBASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 AC099343.3-201ENST00000605834 2503 ntBASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 ZNF259P1-201ENST00000407656 1365 ntBASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 MTCL1P1-201ENST00000446207 792 ntBASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPBQ9Y5S2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPBQ9Y5S2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC27.74■■■□□ 2.03
CDC42BPBQ9Y5S2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPBQ9Y5S2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms