Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 AL499627.1-201ENST00000569373 2188 ntBASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 SEC1P-202ENST00000473944 940 ntBASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 AC034232.1-201ENST00000506026 1064 ntBASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 AL358472.4-201ENST00000633140 710 ntBASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A3BPQ9Y5P4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 RASA4DP-201ENST00000460726 1199 ntBASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 KRT8P7-201ENST00000533003 1432 ntBASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.61■□□□□ 0.89
COL4A3BPQ9Y5P4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 AP000593.1-201ENST00000393668 712 ntBASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 KRT18P23-201ENST00000435622 1283 ntBASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 HYMAI.1-201ENST00000620949 238 ntBASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 HOXB1-202ENST00000577092 1414 ntBASIC20.6■□□□□ 0.89
COL4A3BPQ9Y5P4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms