Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN16Q9Y5I7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN16Q9Y5I7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN16Q9Y5I7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN16Q9Y5I7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN16Q9Y5I7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN16Q9Y5I7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN16Q9Y5I7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLDN16Q9Y5I7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN16Q9Y5I7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN16Q9Y5I7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN16Q9Y5I7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN16Q9Y5I7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN16Q9Y5I7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN16Q9Y5I7 KRT89P-201ENST00000620027 1478 ntBASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 AL645929.1-201ENST00000420084 975 ntBASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN16Q9Y5I7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 AC090164.3-201ENST00000610780 2143 ntBASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 AC024563.2-201ENST00000603282 481 ntBASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN16Q9Y5I7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN16Q9Y5I7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms