Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 SPDYE15P-201ENST00000424157 909 ntBASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PCDHGA6Q9Y5G7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA6Q9Y5G7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA6Q9Y5G7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.77■□□□□ 0.43
PCDHGA6Q9Y5G7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA6Q9Y5G7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.77■□□□□ 0.43
PCDHGA6Q9Y5G7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.77■□□□□ 0.43
PCDHGA6Q9Y5G7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 HCG4P8-203ENST00000443049 980 ntBASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 AC034232.1-201ENST00000506026 1064 ntBASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA6Q9Y5G7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 DUSP5P1-201ENST00000441325 1139 ntBASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA6Q9Y5G7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms