Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 KRT18P38-201ENST00000449496 1282 ntBASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PCDHB11Q9Y5F2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 AC036111.1-201ENST00000533973 1582 ntBASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 MTMR9LP-203ENST00000426597 1545 ntBASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 MIR564-202ENST00000385049 94 ntBASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 STARP1-201ENST00000397973 869 ntBASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 CLEC4GP1-201ENST00000596555 870 ntBASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 LINC01311-201ENST00000565162 1445 ntBASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB11Q9Y5F2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms