Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 MTDHP1-201ENST00000605323 784 ntBASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 SIRPAP1-201ENST00000448467 1770 ntBASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SAMD4AQ9UPU9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 KRT17P3-201ENST00000420566 1262 ntBASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SAMD4AQ9UPU9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
SAMD4AQ9UPU9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SAMD4AQ9UPU9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.27■□□□□ 0.35
SAMD4AQ9UPU9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.27■□□□□ 0.35
SAMD4AQ9UPU9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SAMD4AQ9UPU9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SAMD4AQ9UPU9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SAMD4AQ9UPU9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SAMD4AQ9UPU9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SAMD4AQ9UPU9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SAMD4AQ9UPU9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SAMD4AQ9UPU9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.27■□□□□ 0.35
SAMD4AQ9UPU9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 PRORSD1P-202ENST00000563365 2154 ntBASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 AC008403.3-201ENST00000598924 454 ntBASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SAMD4AQ9UPU9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.25■□□□□ 0.35
SAMD4AQ9UPU9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms