Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 ESRRAP1-201ENST00000400596 1257 ntBASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 KRT18P6-201ENST00000555540 1265 ntBASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGB4Q9UN71 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGB4Q9UN71 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 KRT8P41-201ENST00000533985 1514 ntBASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 AC233263.1-201ENST00000578059 224 ntBASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 AC110285.5-201ENST00000611501 352 ntBASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB4Q9UN71 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 AC126763.1-201ENST00000552015 2118 ntBASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB4Q9UN71 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 AC084018.2-201ENST00000613093 2607 ntBASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms