Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 CRYGFP-201ENST00000418459 633 ntBASIC17.86■□□□□ 0.45
VPS4AQ9UN37 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 AC092647.4-201ENST00000457211 535 ntBASIC17.86■□□□□ 0.45
VPS4AQ9UN37 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 AC026271.3-201ENST00000571884 352 ntBASIC17.86■□□□□ 0.45
VPS4AQ9UN37 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS4AQ9UN37 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 AC097488.1-201ENST00000507834 756 ntBASIC17.85■□□□□ 0.45
VPS4AQ9UN37 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 AP000550.4-202ENST00000639755 178 ntBASIC17.85■□□□□ 0.45
VPS4AQ9UN37 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS4AQ9UN37 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.84■□□□□ 0.45
VPS4AQ9UN37 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 RNF152P1-201ENST00000397754 604 ntBASIC17.84■□□□□ 0.45
VPS4AQ9UN37 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.84■□□□□ 0.45
VPS4AQ9UN37 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 AL390961.4-201ENST00000623958 2535 ntBASIC17.84■□□□□ 0.45
VPS4AQ9UN37 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 AL133373.2-201ENST00000623187 2828 ntBASIC17.84■□□□□ 0.45
VPS4AQ9UN37 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS4AQ9UN37 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.83■□□□□ 0.45
VPS4AQ9UN37 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VPS4AQ9UN37 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VPS4AQ9UN37 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.83■□□□□ 0.45
VPS4AQ9UN37 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms