Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 IGHGP-201ENST00000390555 1178 ntBASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 GPR32P1-201ENST00000601788 811 ntBASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 AL390719.2-201ENST00000606993 987 ntBASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 NPAP1P7-201ENST00000613027 823 ntBASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.74■□□□□ 0.75
UBQLN1Q9UMX0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 AC099343.3-201ENST00000605834 2503 ntBASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN1Q9UMX0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 CHCHD2P8-201ENST00000429873 447 ntBASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 HCG4P8-203ENST00000443049 980 ntBASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN1Q9UMX0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 AL024508.2-201ENST00000607749 1894 ntBASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms