Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 BICD1-207ENST00000551848 1962 ntBASIC18.79■□□□□ 0.6
UBP1Q9NZI7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 KRT18P41-201ENST00000518924 1277 ntBASIC18.79■□□□□ 0.6
UBP1Q9NZI7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 WWOX-216ENST00000569818 525 ntBASIC18.79■□□□□ 0.6
UBP1Q9NZI7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 AC133561.5-201ENST00000635547 218 ntBASIC18.79■□□□□ 0.6
UBP1Q9NZI7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 HTR7P1-202ENST00000624664 4411 ntBASIC18.79■□□□□ 0.6
UBP1Q9NZI7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBP1Q9NZI7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 KRT18P22-201ENST00000402024 1347 ntBASIC18.77■□□□□ 0.6
UBP1Q9NZI7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 HMGA1P5-201ENST00000412453 271 ntBASIC18.77■□□□□ 0.6
UBP1Q9NZI7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 AC009947.2-201ENST00000444014 672 ntBASIC18.77■□□□□ 0.6
UBP1Q9NZI7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms