Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AL162741.1-201ENST00000565563 1558 ntBASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 MST1L-201ENST00000442552 2185 ntBASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 KRT8P41-201ENST00000533985 1514 ntBASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 AL445675.2-201ENST00000620291 557 ntBASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 BICD1-207ENST00000551848 1962 ntBASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 NFIC-211ENST00000641145 8399 ntBASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB16Q9NRJ7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 KRASP1-201ENST00000407852 552 ntBASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB16Q9NRJ7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms